Gene : Glyma.12G112500 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR31533:SF2 - GPI-ANCHORED PROTEIN LORELEI-RELATED Genomic Order:  1125
Name:  ? Glyma.12G112500 Secondary Identifier:  ? PAC:30548023
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G112500 0.5kb upstream 0.5kb upstream 3865 true Chr12: 10953748-10957612 Glycine max
Glyma.12G112500 0.5kb upstream 0.5kb upstream 500 false Chr12: 10953748-10954247 Glycine max
Glyma.12G112500 0.5kb downstream 0.5kb downstream 3865 true Chr12: 10954248-10958112 Glycine max
Glyma.12G112500 0.5kb downstream 0.5kb downstream 500 false Chr12: 10957613-10958112 Glycine max
Glyma.12G112500 1.0kb upstream 1.0kb upstream 4365 true Chr12: 10953248-10957612 Glycine max
Glyma.12G112500 1.0kb upstream 1.0kb upstream 1000 false Chr12: 10953248-10954247 Glycine max
Glyma.12G112500 1.0kb downstream 1.0kb downstream 4365 true Chr12: 10954248-10958612 Glycine max
Glyma.12G112500 1.0kb downstream 1.0kb downstream 1000 false Chr12: 10957613-10958612 Glycine max
Glyma.12G112500 2.0kb upstream 2.0kb upstream 5365 true Chr12: 10952248-10957612 Glycine max
Glyma.12G112500 2.0kb upstream 2.0kb upstream 2000 false Chr12: 10952248-10954247 Glycine max
Glyma.12G112500 2.0kb downstream 2.0kb downstream 5365 true Chr12: 10954248-10959612 Glycine max
Glyma.12G112500 2.0kb downstream 2.0kb downstream 2000 false Chr12: 10957613-10959612 Glycine max
Glyma.12G112500 5.0kb upstream 5.0kb upstream 8365 true Chr12: 10949248-10957612 Glycine max
Glyma.12G112500 5.0kb upstream 5.0kb upstream 5000 false Chr12: 10949248-10954247 Glycine max
Glyma.12G112500 5.0kb downstream 5.0kb downstream 8365 true Chr12: 10954248-10962612 Glycine max
Glyma.12G112500 5.0kb downstream 5.0kb downstream 5000 false Chr12: 10957613-10962612 Glycine max
Glyma.12G112500 10.0kb upstream 10.0kb upstream 13365 true Chr12: 10944248-10957612 Glycine max
Glyma.12G112500 10.0kb upstream 10.0kb upstream 10000 false Chr12: 10944248-10954247 Glycine max
Glyma.12G112500 10.0kb downstream 10.0kb downstream 13365 true Chr12: 10954248-10967612 Glycine max
Glyma.12G112500 10.0kb downstream 10.0kb downstream 10000 false Chr12: 10957613-10967612 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309501 5265 Fabidae View MSA
124072750 5270 Rosid View MSA
123750989 5271 Pentapetalae View MSA
122787745 5272 Eudicot View MSA
122045868 5273 Angiosperm View MSA
121350043 5274 Embryophyte View MSA
123381553 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0751905 0.0 0.3118 Low  
cufflinks 30.1715 0.0 80.7073 High High
cufflinks 0.181987 0.0 0.724112    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.225 0.0 0.888482    
cufflinks 0.0492502 0.0 0.210012 Low  
cufflinks 0.025456 0.0 0.115137 Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.176       High
cufflinks 0.014     Low  
cufflinks 0.004     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.01     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.341       High
cufflinks 0.013     Low  
cufflinks 0.005     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.013     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.023     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain