Gene : Glyma.12G113100 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11615//PTHR11615:SF159 - NITRATE, FROMATE, IRON DEHYDROGENASE Genomic Order:  1131
Name:  ? Glyma.12G113100 Secondary Identifier:  ? PAC:30546993
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G113100 0.5kb upstream 0.5kb upstream 2060 true Chr12: 11077864-11079923 Glycine max
Glyma.12G113100 0.5kb upstream 0.5kb upstream 500 false Chr12: 11077864-11078363 Glycine max
Glyma.12G113100 0.5kb downstream 0.5kb downstream 2060 true Chr12: 11078364-11080423 Glycine max
Glyma.12G113100 0.5kb downstream 0.5kb downstream 500 false Chr12: 11079924-11080423 Glycine max
Glyma.12G113100 1.0kb upstream 1.0kb upstream 2560 true Chr12: 11077364-11079923 Glycine max
Glyma.12G113100 1.0kb upstream 1.0kb upstream 1000 false Chr12: 11077364-11078363 Glycine max
Glyma.12G113100 1.0kb downstream 1.0kb downstream 2560 true Chr12: 11078364-11080923 Glycine max
Glyma.12G113100 1.0kb downstream 1.0kb downstream 1000 false Chr12: 11079924-11080923 Glycine max
Glyma.12G113100 2.0kb upstream 2.0kb upstream 3560 true Chr12: 11076364-11079923 Glycine max
Glyma.12G113100 2.0kb upstream 2.0kb upstream 2000 false Chr12: 11076364-11078363 Glycine max
Glyma.12G113100 2.0kb downstream 2.0kb downstream 3560 true Chr12: 11078364-11081923 Glycine max
Glyma.12G113100 2.0kb downstream 2.0kb downstream 2000 false Chr12: 11079924-11081923 Glycine max
Glyma.12G113100 5.0kb upstream 5.0kb upstream 6560 true Chr12: 11073364-11079923 Glycine max
Glyma.12G113100 5.0kb upstream 5.0kb upstream 5000 false Chr12: 11073364-11078363 Glycine max
Glyma.12G113100 5.0kb downstream 5.0kb downstream 6560 true Chr12: 11078364-11084923 Glycine max
Glyma.12G113100 5.0kb downstream 5.0kb downstream 5000 false Chr12: 11079924-11084923 Glycine max
Glyma.12G113100 10.0kb upstream 10.0kb upstream 11560 true Chr12: 11068364-11079923 Glycine max
Glyma.12G113100 10.0kb upstream 10.0kb upstream 10000 false Chr12: 11068364-11078363 Glycine max
Glyma.12G113100 10.0kb downstream 10.0kb downstream 11560 true Chr12: 11078364-11089923 Glycine max
Glyma.12G113100 10.0kb downstream 10.0kb downstream 10000 false Chr12: 11079924-11089923 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306746 5265 Fabidae View MSA
124065013 5270 Rosid View MSA
123743264 5271 Pentapetalae View MSA
122793197 5272 Eudicot View MSA
122049242 5273 Angiosperm View MSA
121351638 5274 Embryophyte View MSA
123382256 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.169143 0.0 0.682101 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.285969 0.0 1.1287    
cufflinks 0.0178619 0.0 0.0858807 Low Low
cufflinks 1.89995 0.0 6.88933   High
cufflinks 0.808723 0.0 3.06275    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.58869 0.0 2.25932    
cufflinks 1.48315 0.0 5.4521    
cufflinks 0.048     Low  
cufflinks 0.274        
cufflinks 0.161        
cufflinks 0.24        
cufflinks 0.106        
cufflinks 0.189        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.375       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.147        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.357        
cufflinks 0.025     Low Low
cufflinks 0.137        
cufflinks 0.981       High
cufflinks 0.009     Low Low
cufflinks 0.802       High

0 Strain