Gene : Glyma.12G113400 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31451:SF1 - MANNAN ENDO-1,4-BETA-MANNOSIDASE 2-RELATED Genomic Order:  1134
Name:  ? Glyma.12G113400 Secondary Identifier:  ? PAC:30548726
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G113400 0.5kb upstream 0.5kb upstream 5248 true Chr12: 11135703-11140950 Glycine max
Glyma.12G113400 0.5kb upstream 0.5kb upstream 500 false Chr12: 11140451-11140950 Glycine max
Glyma.12G113400 0.5kb downstream 0.5kb downstream 5248 true Chr12: 11135203-11140450 Glycine max
Glyma.12G113400 0.5kb downstream 0.5kb downstream 500 false Chr12: 11135203-11135702 Glycine max
Glyma.12G113400 1.0kb upstream 1.0kb upstream 5748 true Chr12: 11135703-11141450 Glycine max
Glyma.12G113400 1.0kb upstream 1.0kb upstream 1000 false Chr12: 11140451-11141450 Glycine max
Glyma.12G113400 1.0kb downstream 1.0kb downstream 5748 true Chr12: 11134703-11140450 Glycine max
Glyma.12G113400 1.0kb downstream 1.0kb downstream 1000 false Chr12: 11134703-11135702 Glycine max
Glyma.12G113400 2.0kb upstream 2.0kb upstream 6748 true Chr12: 11135703-11142450 Glycine max
Glyma.12G113400 2.0kb upstream 2.0kb upstream 2000 false Chr12: 11140451-11142450 Glycine max
Glyma.12G113400 2.0kb downstream 2.0kb downstream 6748 true Chr12: 11133703-11140450 Glycine max
Glyma.12G113400 2.0kb downstream 2.0kb downstream 2000 false Chr12: 11133703-11135702 Glycine max
Glyma.12G113400 5.0kb upstream 5.0kb upstream 9748 true Chr12: 11135703-11145450 Glycine max
Glyma.12G113400 5.0kb upstream 5.0kb upstream 5000 false Chr12: 11140451-11145450 Glycine max
Glyma.12G113400 5.0kb downstream 5.0kb downstream 9748 true Chr12: 11130703-11140450 Glycine max
Glyma.12G113400 5.0kb downstream 5.0kb downstream 5000 false Chr12: 11130703-11135702 Glycine max
Glyma.12G113400 10.0kb upstream 10.0kb upstream 14748 true Chr12: 11135703-11150450 Glycine max
Glyma.12G113400 10.0kb upstream 10.0kb upstream 10000 false Chr12: 11140451-11150450 Glycine max
Glyma.12G113400 10.0kb downstream 10.0kb downstream 14748 true Chr12: 11125703-11140450 Glycine max
Glyma.12G113400 10.0kb downstream 10.0kb downstream 10000 false Chr12: 11125703-11135702 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314019 5265 Fabidae View MSA
124068512 5270 Rosid View MSA
123745616 5271 Pentapetalae View MSA
122797757 5272 Eudicot View MSA
122048761 5273 Angiosperm View MSA
121348976 5274 Embryophyte View MSA
123428551 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.04279 0.0 14.7097   Low
cufflinks 8.92978 0.0 27.4269    
cufflinks 4.90335 0.0 23.3188   Low
cufflinks 13.9279 0.0 41.6003    
cufflinks 20.0073 0.0 59.9921 High  
cufflinks 27.6052 0.0 119.04 High High
cufflinks 7.44282 0.0 23.4956    
cufflinks 40.8173 0.0 137.111 High High
cufflinks 16.0907 0.0 67.449    
cufflinks 6.065       High
cufflinks 1.166       Low
cufflinks 1.649        
cufflinks 7.42     High High
cufflinks 7.24     High High
cufflinks 2.629        
cufflinks 2.816        
cufflinks 1.811        
cufflinks 2.787        
cufflinks 3.457        
cufflinks 1.61        
cufflinks 5.554       High
cufflinks 2.043        
cufflinks 1.478       Low
cufflinks 2.789        
cufflinks 1.907        
cufflinks 4.034        

0 Strain