Gene : Glyma.12G113500 G. max Wm82.a2.v1
Genomic Order:  1135 Name:  ? Glyma.12G113500
Secondary Identifier:  ? PAC:30547827
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G113500 0.5kb upstream 0.5kb upstream 3133 true Chr12: 11148838-11151970 Glycine max
Glyma.12G113500 0.5kb upstream 0.5kb upstream 500 false Chr12: 11151471-11151970 Glycine max
Glyma.12G113500 0.5kb downstream 0.5kb downstream 3133 true Chr12: 11148338-11151470 Glycine max
Glyma.12G113500 0.5kb downstream 0.5kb downstream 500 false Chr12: 11148338-11148837 Glycine max
Glyma.12G113500 1.0kb upstream 1.0kb upstream 3633 true Chr12: 11148838-11152470 Glycine max
Glyma.12G113500 1.0kb upstream 1.0kb upstream 1000 false Chr12: 11151471-11152470 Glycine max
Glyma.12G113500 1.0kb downstream 1.0kb downstream 3633 true Chr12: 11147838-11151470 Glycine max
Glyma.12G113500 1.0kb downstream 1.0kb downstream 1000 false Chr12: 11147838-11148837 Glycine max
Glyma.12G113500 2.0kb upstream 2.0kb upstream 4633 true Chr12: 11148838-11153470 Glycine max
Glyma.12G113500 2.0kb upstream 2.0kb upstream 2000 false Chr12: 11151471-11153470 Glycine max
Glyma.12G113500 2.0kb downstream 2.0kb downstream 4633 true Chr12: 11146838-11151470 Glycine max
Glyma.12G113500 2.0kb downstream 2.0kb downstream 2000 false Chr12: 11146838-11148837 Glycine max
Glyma.12G113500 5.0kb upstream 5.0kb upstream 7633 true Chr12: 11148838-11156470 Glycine max
Glyma.12G113500 5.0kb upstream 5.0kb upstream 5000 false Chr12: 11151471-11156470 Glycine max
Glyma.12G113500 5.0kb downstream 5.0kb downstream 7633 true Chr12: 11143838-11151470 Glycine max
Glyma.12G113500 5.0kb downstream 5.0kb downstream 5000 false Chr12: 11143838-11148837 Glycine max
Glyma.12G113500 10.0kb upstream 10.0kb upstream 12633 true Chr12: 11148838-11161470 Glycine max
Glyma.12G113500 10.0kb upstream 10.0kb upstream 10000 false Chr12: 11151471-11161470 Glycine max
Glyma.12G113500 10.0kb downstream 10.0kb downstream 12633 true Chr12: 11138838-11151470 Glycine max
Glyma.12G113500 10.0kb downstream 10.0kb downstream 10000 false Chr12: 11138838-11148837 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312770 5265 Fabidae View MSA
124066969 5270 Rosid View MSA
123737431 5271 Pentapetalae View MSA
122786283 5272 Eudicot View MSA
122041638 5273 Angiosperm View MSA
121351173 5274 Embryophyte View MSA
123382036 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.28709 0.0 23.1809    
cufflinks 2.32338 0.0 15.8662    
cufflinks 1.18591 0.0 10.123   Low
cufflinks 4.52761 0.0 27.3569    
cufflinks 2.92593 0.0 15.4948    
cufflinks 4.09993 0.0 24.2431    
cufflinks 0.991161 0.0 7.12706   Low
cufflinks 6.22847 0.0 28.1919   High
cufflinks 2.35801 0.0 15.7136    
cufflinks 0.2        
cufflinks 0.088        
cufflinks 0.155        
cufflinks 0.097        
cufflinks 0.07     Low Low
cufflinks 0.104        
cufflinks 0.298        
cufflinks 0.139        
cufflinks 0.139        
cufflinks 0.299        
cufflinks 0.457       High
cufflinks 0.08       Low
cufflinks 0.422       High
cufflinks 0.358       High
cufflinks 0.125        
cufflinks 0.397       High
cufflinks 0.078       Low

0 Strain