Gene : Glyma.12G114300 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR13935:SF53 - BASIC HELIX-LOOP-HELIX DOMAIN-CONTAINING PROTEIN Genomic Order:  1143
Name:  ? Glyma.12G114300 Secondary Identifier:  ? PAC:30546007
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G114300 0.5kb upstream 0.5kb upstream 1963 true Chr12: 11349520-11351482 Glycine max
Glyma.12G114300 0.5kb upstream 0.5kb upstream 500 false Chr12: 11349520-11350019 Glycine max
Glyma.12G114300 0.5kb downstream 0.5kb downstream 1963 true Chr12: 11350020-11351982 Glycine max
Glyma.12G114300 0.5kb downstream 0.5kb downstream 500 false Chr12: 11351483-11351982 Glycine max
Glyma.12G114300 1.0kb upstream 1.0kb upstream 2463 true Chr12: 11349020-11351482 Glycine max
Glyma.12G114300 1.0kb upstream 1.0kb upstream 1000 false Chr12: 11349020-11350019 Glycine max
Glyma.12G114300 1.0kb downstream 1.0kb downstream 2463 true Chr12: 11350020-11352482 Glycine max
Glyma.12G114300 1.0kb downstream 1.0kb downstream 1000 false Chr12: 11351483-11352482 Glycine max
Glyma.12G114300 2.0kb upstream 2.0kb upstream 3463 true Chr12: 11348020-11351482 Glycine max
Glyma.12G114300 2.0kb upstream 2.0kb upstream 2000 false Chr12: 11348020-11350019 Glycine max
Glyma.12G114300 2.0kb downstream 2.0kb downstream 3463 true Chr12: 11350020-11353482 Glycine max
Glyma.12G114300 2.0kb downstream 2.0kb downstream 2000 false Chr12: 11351483-11353482 Glycine max
Glyma.12G114300 5.0kb upstream 5.0kb upstream 6463 true Chr12: 11345020-11351482 Glycine max
Glyma.12G114300 5.0kb upstream 5.0kb upstream 5000 false Chr12: 11345020-11350019 Glycine max
Glyma.12G114300 5.0kb downstream 5.0kb downstream 6463 true Chr12: 11350020-11356482 Glycine max
Glyma.12G114300 5.0kb downstream 5.0kb downstream 5000 false Chr12: 11351483-11356482 Glycine max
Glyma.12G114300 10.0kb upstream 10.0kb upstream 11463 true Chr12: 11340020-11351482 Glycine max
Glyma.12G114300 10.0kb upstream 10.0kb upstream 10000 false Chr12: 11340020-11350019 Glycine max
Glyma.12G114300 10.0kb downstream 10.0kb downstream 11463 true Chr12: 11350020-11361482 Glycine max
Glyma.12G114300 10.0kb downstream 10.0kb downstream 10000 false Chr12: 11351483-11361482 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040931 5273 Angiosperm View MSA
122308200 5265 Fabidae View MSA
124070825 5270 Rosid View MSA
123745471 5271 Pentapetalae View MSA
122795033 5272 Eudicot View MSA
121309769 5274 Embryophyte View MSA
123347432 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.126664 0.0 0.510795 Low  
cufflinks 0.387603 0.0 1.49682   High
cufflinks 0.618036 0.0 2.3359   High
cufflinks 0.319997 0.0 1.24489    
cufflinks 0.0423608 0.0 0.182911 Low Low
cufflinks 0.0948744 0.0 0.387897 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0474209 0.0 0.202212 Low  
cufflinks 0.0490475 0.0 0.209034 Low  
cufflinks 3.822        
cufflinks 3.854        
cufflinks 1.745        
cufflinks 0.088     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.132        
cufflinks 0.189       Low
cufflinks 20.888     High High
cufflinks 2.593        
cufflinks 1.306        
cufflinks 0.235       Low
cufflinks 2.877        
cufflinks 0.291        
cufflinks 1.615        
cufflinks 2.425        
cufflinks 0.113       Low
cufflinks 4.779        

0 Strain