Gene : Glyma.12G171000 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR31384:SF20 - AUXIN RESPONSE FACTOR 4 Genomic Order:  1710
Name:  ? Glyma.12G171000 Secondary Identifier:  ? PAC:30547602
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G171000 0.5kb upstream 0.5kb upstream 7071 true Chr12: 32643495-32650565 Glycine max
Glyma.12G171000 0.5kb upstream 0.5kb upstream 500 false Chr12: 32650066-32650565 Glycine max
Glyma.12G171000 0.5kb downstream 0.5kb downstream 7071 true Chr12: 32642995-32650065 Glycine max
Glyma.12G171000 0.5kb downstream 0.5kb downstream 500 false Chr12: 32642995-32643494 Glycine max
Glyma.12G171000 1.0kb upstream 1.0kb upstream 7571 true Chr12: 32643495-32651065 Glycine max
Glyma.12G171000 1.0kb upstream 1.0kb upstream 1000 false Chr12: 32650066-32651065 Glycine max
Glyma.12G171000 1.0kb downstream 1.0kb downstream 7571 true Chr12: 32642495-32650065 Glycine max
Glyma.12G171000 1.0kb downstream 1.0kb downstream 1000 false Chr12: 32642495-32643494 Glycine max
Glyma.12G171000 2.0kb upstream 2.0kb upstream 8571 true Chr12: 32643495-32652065 Glycine max
Glyma.12G171000 2.0kb upstream 2.0kb upstream 2000 false Chr12: 32650066-32652065 Glycine max
Glyma.12G171000 2.0kb downstream 2.0kb downstream 8571 true Chr12: 32641495-32650065 Glycine max
Glyma.12G171000 2.0kb downstream 2.0kb downstream 2000 false Chr12: 32641495-32643494 Glycine max
Glyma.12G171000 5.0kb upstream 5.0kb upstream 11571 true Chr12: 32643495-32655065 Glycine max
Glyma.12G171000 5.0kb upstream 5.0kb upstream 5000 false Chr12: 32650066-32655065 Glycine max
Glyma.12G171000 5.0kb downstream 5.0kb downstream 11571 true Chr12: 32638495-32650065 Glycine max
Glyma.12G171000 5.0kb downstream 5.0kb downstream 5000 false Chr12: 32638495-32643494 Glycine max
Glyma.12G171000 10.0kb upstream 10.0kb upstream 16571 true Chr12: 32643495-32660065 Glycine max
Glyma.12G171000 10.0kb upstream 10.0kb upstream 10000 false Chr12: 32650066-32660065 Glycine max
Glyma.12G171000 10.0kb downstream 10.0kb downstream 16571 true Chr12: 32633495-32650065 Glycine max
Glyma.12G171000 10.0kb downstream 10.0kb downstream 10000 false Chr12: 32633495-32643494 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310336 5265 Fabidae View MSA
124066923 5270 Rosid View MSA
123747350 5271 Pentapetalae View MSA
122795169 5272 Eudicot View MSA
122043529 5273 Angiosperm View MSA
121310144 5274 Embryophyte View MSA
123347713 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.93835 0.0 42.7144    
cufflinks 13.9332 0.0 72.2397   High
cufflinks 2.24 0.0 13.0829   Low
cufflinks 7.50715 0.0 39.2758    
cufflinks 5.24074 0.0 26.94    
cufflinks 1.17504 0.0 8.29553   Low
cufflinks 6.37362 0.0 37.1968    
cufflinks 10.2351 0.0 56.5317    
cufflinks 4.25173 0.0 20.5886    
cufflinks 0.453        
cufflinks 0.064       Low
cufflinks 0.239        
cufflinks 0.247        
cufflinks 0.164        
cufflinks 0.053       Low
cufflinks 0.452        
cufflinks 0.14        
cufflinks 0.27        
cufflinks 1.43       High
cufflinks 0.291        
cufflinks 0.215        
cufflinks 0.411        
cufflinks 0.439        
cufflinks 0.166        
cufflinks 0.328        
cufflinks 0.091       Low

0 Strain