Gene : Glyma.12G172500 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR19139:SF158 - AQUAPORIN PIP2-4-RELATED Genomic Order:  1725
Name:  ? Glyma.12G172500 Secondary Identifier:  ? PAC:30548584
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G172500 0.5kb upstream 0.5kb upstream 2242 true Chr12: 32885991-32888232 Glycine max
Glyma.12G172500 0.5kb upstream 0.5kb upstream 500 false Chr12: 32885991-32886490 Glycine max
Glyma.12G172500 0.5kb downstream 0.5kb downstream 2242 true Chr12: 32886491-32888732 Glycine max
Glyma.12G172500 0.5kb downstream 0.5kb downstream 500 false Chr12: 32888233-32888732 Glycine max
Glyma.12G172500 1.0kb upstream 1.0kb upstream 2742 true Chr12: 32885491-32888232 Glycine max
Glyma.12G172500 1.0kb upstream 1.0kb upstream 1000 false Chr12: 32885491-32886490 Glycine max
Glyma.12G172500 1.0kb downstream 1.0kb downstream 2742 true Chr12: 32886491-32889232 Glycine max
Glyma.12G172500 1.0kb downstream 1.0kb downstream 1000 false Chr12: 32888233-32889232 Glycine max
Glyma.12G172500 2.0kb upstream 2.0kb upstream 3742 true Chr12: 32884491-32888232 Glycine max
Glyma.12G172500 2.0kb upstream 2.0kb upstream 2000 false Chr12: 32884491-32886490 Glycine max
Glyma.12G172500 2.0kb downstream 2.0kb downstream 3742 true Chr12: 32886491-32890232 Glycine max
Glyma.12G172500 2.0kb downstream 2.0kb downstream 2000 false Chr12: 32888233-32890232 Glycine max
Glyma.12G172500 5.0kb upstream 5.0kb upstream 6742 true Chr12: 32881491-32888232 Glycine max
Glyma.12G172500 5.0kb upstream 5.0kb upstream 5000 false Chr12: 32881491-32886490 Glycine max
Glyma.12G172500 5.0kb downstream 5.0kb downstream 6742 true Chr12: 32886491-32893232 Glycine max
Glyma.12G172500 5.0kb downstream 5.0kb downstream 5000 false Chr12: 32888233-32893232 Glycine max
Glyma.12G172500 10.0kb upstream 10.0kb upstream 11742 true Chr12: 32876491-32888232 Glycine max
Glyma.12G172500 10.0kb upstream 10.0kb upstream 10000 false Chr12: 32876491-32886490 Glycine max
Glyma.12G172500 10.0kb downstream 10.0kb downstream 11742 true Chr12: 32886491-32898232 Glycine max
Glyma.12G172500 10.0kb downstream 10.0kb downstream 10000 false Chr12: 32888233-32898232 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296342 5265 Fabidae View MSA
124072512 5270 Rosid View MSA
123751650 5271 Pentapetalae View MSA
122791496 5272 Eudicot View MSA
122046313 5273 Angiosperm View MSA
121349621 5274 Embryophyte View MSA
123428679 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.0413 0.0 84.5099 High Low
cufflinks 43.0439 0.0 192.178 High  
cufflinks 167.032 0.0 1041.39 High  
cufflinks 132.108 0.0 722.08 High  
cufflinks 116.167 0.0 614.376 High  
cufflinks 729.594 0.0 13368.1 High High
cufflinks 35.3875 0.0 155.963 High  
cufflinks 60.8497 0.0 289.278 High  
cufflinks 104.192 0.0 584.455 High  
cufflinks 13.476     High  
cufflinks 11.213     High  
cufflinks 26.07     High  
cufflinks 58.409     High High
cufflinks 22.699     High  
cufflinks 7.153     High Low
cufflinks 15.281     High  
cufflinks 8.339     High Low
cufflinks 9.928     High  
cufflinks 11.514     High  
cufflinks 19.67     High  
cufflinks 16.989     High  
cufflinks 12.765     High  
cufflinks 11.18     High  
cufflinks 8.008     High Low
cufflinks 21.571     High  
cufflinks 28.04     High High

0 Strain