Gene : Glyma.12G173800 G. max Wm82.a2.v1
Defline:  (1 of 35) PTHR32077:SF7 - FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 11 Genomic Order:  1738
Name:  ? Glyma.12G173800 Secondary Identifier:  ? PAC:30547311
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G173800 0.5kb upstream 0.5kb upstream 1772 true Chr12: 33069015-33070786 Glycine max
Glyma.12G173800 0.5kb upstream 0.5kb upstream 500 false Chr12: 33069015-33069514 Glycine max
Glyma.12G173800 0.5kb downstream 0.5kb downstream 1772 true Chr12: 33069515-33071286 Glycine max
Glyma.12G173800 0.5kb downstream 0.5kb downstream 500 false Chr12: 33070787-33071286 Glycine max
Glyma.12G173800 1.0kb upstream 1.0kb upstream 2272 true Chr12: 33068515-33070786 Glycine max
Glyma.12G173800 1.0kb upstream 1.0kb upstream 1000 false Chr12: 33068515-33069514 Glycine max
Glyma.12G173800 1.0kb downstream 1.0kb downstream 2272 true Chr12: 33069515-33071786 Glycine max
Glyma.12G173800 1.0kb downstream 1.0kb downstream 1000 false Chr12: 33070787-33071786 Glycine max
Glyma.12G173800 2.0kb upstream 2.0kb upstream 3272 true Chr12: 33067515-33070786 Glycine max
Glyma.12G173800 2.0kb upstream 2.0kb upstream 2000 false Chr12: 33067515-33069514 Glycine max
Glyma.12G173800 2.0kb downstream 2.0kb downstream 3272 true Chr12: 33069515-33072786 Glycine max
Glyma.12G173800 2.0kb downstream 2.0kb downstream 2000 false Chr12: 33070787-33072786 Glycine max
Glyma.12G173800 5.0kb upstream 5.0kb upstream 6272 true Chr12: 33064515-33070786 Glycine max
Glyma.12G173800 5.0kb upstream 5.0kb upstream 5000 false Chr12: 33064515-33069514 Glycine max
Glyma.12G173800 5.0kb downstream 5.0kb downstream 6272 true Chr12: 33069515-33075786 Glycine max
Glyma.12G173800 5.0kb downstream 5.0kb downstream 5000 false Chr12: 33070787-33075786 Glycine max
Glyma.12G173800 10.0kb upstream 10.0kb upstream 11272 true Chr12: 33059515-33070786 Glycine max
Glyma.12G173800 10.0kb upstream 10.0kb upstream 10000 false Chr12: 33059515-33069514 Glycine max
Glyma.12G173800 10.0kb downstream 10.0kb downstream 11272 true Chr12: 33069515-33080786 Glycine max
Glyma.12G173800 10.0kb downstream 10.0kb downstream 10000 false Chr12: 33070787-33080786 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314337 5265 Fabidae View MSA
124062228 5270 Rosid View MSA
123750165 5271 Pentapetalae View MSA
122791630 5272 Eudicot View MSA
122047379 5273 Angiosperm View MSA
121351509 5274 Embryophyte View MSA
123426561 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.2918 0.0 57.1859    
cufflinks 29.6252 0.0 79.0376 High  
cufflinks 2.55155 0.0 8.69679    
cufflinks 34.2275 0.0 91.3909 High  
cufflinks 34.3793 0.0 91.7872 High  
cufflinks 4.11132 0.0 13.147    
cufflinks 0.217008 0.0 0.851313   Low
cufflinks 247.528 0.0 843.958 High High
cufflinks 29.6287 0.0 79.0457 High  
cufflinks 240.122     High High
cufflinks 1.32        
cufflinks 2.184        
cufflinks 14.827     High  
cufflinks 5.059        
cufflinks 0.117       Low
cufflinks 7.423     High  
cufflinks 24.597     High High
cufflinks 5.483        
cufflinks 15.983     High  
cufflinks 1.27        
cufflinks 4.218        
cufflinks 2.95        
cufflinks 3.903        
cufflinks 1.608        
cufflinks 4.406        
cufflinks 4.469        

0 Strain