Gene : Glyma.12G174400 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR12136:SF41 - PLECKSTRIN HOMOLOGY (PH) AND LIPID-BINDING START DOMAIN-CONTAINING PROTEIN Genomic Order:  1744
Name:  ? Glyma.12G174400 Secondary Identifier:  ? PAC:30548924
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G174400 0.5kb upstream 0.5kb upstream 8369 true Chr12: 33156448-33164816 Glycine max
Glyma.12G174400 0.5kb upstream 0.5kb upstream 500 false Chr12: 33164317-33164816 Glycine max
Glyma.12G174400 0.5kb downstream 0.5kb downstream 8369 true Chr12: 33155948-33164316 Glycine max
Glyma.12G174400 0.5kb downstream 0.5kb downstream 500 false Chr12: 33155948-33156447 Glycine max
Glyma.12G174400 1.0kb upstream 1.0kb upstream 8869 true Chr12: 33156448-33165316 Glycine max
Glyma.12G174400 1.0kb upstream 1.0kb upstream 1000 false Chr12: 33164317-33165316 Glycine max
Glyma.12G174400 1.0kb downstream 1.0kb downstream 8869 true Chr12: 33155448-33164316 Glycine max
Glyma.12G174400 1.0kb downstream 1.0kb downstream 1000 false Chr12: 33155448-33156447 Glycine max
Glyma.12G174400 2.0kb upstream 2.0kb upstream 9869 true Chr12: 33156448-33166316 Glycine max
Glyma.12G174400 2.0kb upstream 2.0kb upstream 2000 false Chr12: 33164317-33166316 Glycine max
Glyma.12G174400 2.0kb downstream 2.0kb downstream 9869 true Chr12: 33154448-33164316 Glycine max
Glyma.12G174400 2.0kb downstream 2.0kb downstream 2000 false Chr12: 33154448-33156447 Glycine max
Glyma.12G174400 5.0kb upstream 5.0kb upstream 12869 true Chr12: 33156448-33169316 Glycine max
Glyma.12G174400 5.0kb upstream 5.0kb upstream 5000 false Chr12: 33164317-33169316 Glycine max
Glyma.12G174400 5.0kb downstream 5.0kb downstream 12869 true Chr12: 33151448-33164316 Glycine max
Glyma.12G174400 5.0kb downstream 5.0kb downstream 5000 false Chr12: 33151448-33156447 Glycine max
Glyma.12G174400 10.0kb upstream 10.0kb upstream 17869 true Chr12: 33156448-33174316 Glycine max
Glyma.12G174400 10.0kb upstream 10.0kb upstream 10000 false Chr12: 33164317-33174316 Glycine max
Glyma.12G174400 10.0kb downstream 10.0kb downstream 17869 true Chr12: 33146448-33164316 Glycine max
Glyma.12G174400 10.0kb downstream 10.0kb downstream 10000 false Chr12: 33146448-33156447 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307511 5265 Fabidae View MSA
124064744 5270 Rosid View MSA
123746336 5271 Pentapetalae View MSA
122790563 5272 Eudicot View MSA
122046452 5273 Angiosperm View MSA
121347989 5274 Embryophyte View MSA
123428121 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.2345 0.0 45.3838    
cufflinks 8.10865 0.0 30.9935   Low
cufflinks 20.5518 0.0 81.0324 High High
cufflinks 10.7857 0.0 40.8617    
cufflinks 10.2679 0.0 38.5058    
cufflinks 10.5473 0.0 39.1304    
cufflinks 9.63935 0.0 36.4927    
cufflinks 12.1765 0.0 49.6695    
cufflinks 11.9263 0.0 45.1602    
cufflinks 2.171       High
cufflinks 0.649       Low
cufflinks 2.074       High
cufflinks 1.589        
cufflinks 1.481        
cufflinks 4.002       High
cufflinks 1.399        
cufflinks 0.629       Low
cufflinks 1.474        
cufflinks 1.405        
cufflinks 1.064        
cufflinks 0.858        
cufflinks 1.223        
cufflinks 1.001        
cufflinks 0.654       Low
cufflinks 1.13        
cufflinks 1.122        

0 Strain