Gene : Glyma.12G174800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR31210:SF13 - STORAGE PROTEIN-RELATED Genomic Order:  1748
Name:  ? Glyma.12G174800 Secondary Identifier:  ? PAC:30546889
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G174800 0.5kb upstream 0.5kb upstream 7102 true Chr12: 33216212-33223313 Glycine max
Glyma.12G174800 0.5kb upstream 0.5kb upstream 500 false Chr12: 33222814-33223313 Glycine max
Glyma.12G174800 0.5kb downstream 0.5kb downstream 7102 true Chr12: 33215712-33222813 Glycine max
Glyma.12G174800 0.5kb downstream 0.5kb downstream 500 false Chr12: 33215712-33216211 Glycine max
Glyma.12G174800 1.0kb upstream 1.0kb upstream 7602 true Chr12: 33216212-33223813 Glycine max
Glyma.12G174800 1.0kb upstream 1.0kb upstream 1000 false Chr12: 33222814-33223813 Glycine max
Glyma.12G174800 1.0kb downstream 1.0kb downstream 7602 true Chr12: 33215212-33222813 Glycine max
Glyma.12G174800 1.0kb downstream 1.0kb downstream 1000 false Chr12: 33215212-33216211 Glycine max
Glyma.12G174800 2.0kb upstream 2.0kb upstream 8602 true Chr12: 33216212-33224813 Glycine max
Glyma.12G174800 2.0kb upstream 2.0kb upstream 2000 false Chr12: 33222814-33224813 Glycine max
Glyma.12G174800 2.0kb downstream 2.0kb downstream 8602 true Chr12: 33214212-33222813 Glycine max
Glyma.12G174800 2.0kb downstream 2.0kb downstream 2000 false Chr12: 33214212-33216211 Glycine max
Glyma.12G174800 5.0kb upstream 5.0kb upstream 11602 true Chr12: 33216212-33227813 Glycine max
Glyma.12G174800 5.0kb upstream 5.0kb upstream 5000 false Chr12: 33222814-33227813 Glycine max
Glyma.12G174800 5.0kb downstream 5.0kb downstream 11602 true Chr12: 33211212-33222813 Glycine max
Glyma.12G174800 5.0kb downstream 5.0kb downstream 5000 false Chr12: 33211212-33216211 Glycine max
Glyma.12G174800 10.0kb upstream 10.0kb upstream 16602 true Chr12: 33216212-33232813 Glycine max
Glyma.12G174800 10.0kb upstream 10.0kb upstream 10000 false Chr12: 33222814-33232813 Glycine max
Glyma.12G174800 10.0kb downstream 10.0kb downstream 16602 true Chr12: 33206212-33222813 Glycine max
Glyma.12G174800 10.0kb downstream 10.0kb downstream 10000 false Chr12: 33206212-33216211 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306170 5265 Fabidae View MSA
124068224 5270 Rosid View MSA
123742371 5271 Pentapetalae View MSA
122797381 5272 Eudicot View MSA
122046740 5273 Angiosperm View MSA
121347735 5274 Embryophyte View MSA
123426523 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.01543 0.0 9.45632   Low
cufflinks 4.46484 0.0 13.2366    
cufflinks 3.39252 0.0 10.3969    
cufflinks 5.8557 0.0 16.7479    
cufflinks 6.34814 0.0 18.0426    
cufflinks 11.4208 0.0 30.8773   High
cufflinks 3.93186 0.0 11.8991    
cufflinks 5.88341 0.0 16.8408    
cufflinks 3.89952 0.0 11.7881    
cufflinks 1.814       High
cufflinks 0.471        
cufflinks 1.203        
cufflinks 2.412       High
cufflinks 2.713       High
cufflinks 0.268       Low
cufflinks 0.798        
cufflinks 0.501        
cufflinks 1.485        
cufflinks 1.596        
cufflinks 0.415       Low
cufflinks 0.441        
cufflinks 0.58        
cufflinks 0.652        
cufflinks 0.602        
cufflinks 0.585        
cufflinks 0.78        

0 Strain