Gene : Glyma.12G166600 G. max Wm82.a2.v1
Genomic Order:  1666 Name:  ? Glyma.12G166600
Secondary Identifier:  ? PAC:30547216
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G166600 0.5kb upstream 0.5kb upstream 4071 true Chr12: 32109169-32113239 Glycine max
Glyma.12G166600 0.5kb upstream 0.5kb upstream 500 false Chr12: 32112740-32113239 Glycine max
Glyma.12G166600 0.5kb downstream 0.5kb downstream 4071 true Chr12: 32108669-32112739 Glycine max
Glyma.12G166600 0.5kb downstream 0.5kb downstream 500 false Chr12: 32108669-32109168 Glycine max
Glyma.12G166600 1.0kb upstream 1.0kb upstream 4571 true Chr12: 32109169-32113739 Glycine max
Glyma.12G166600 1.0kb upstream 1.0kb upstream 1000 false Chr12: 32112740-32113739 Glycine max
Glyma.12G166600 1.0kb downstream 1.0kb downstream 4571 true Chr12: 32108169-32112739 Glycine max
Glyma.12G166600 1.0kb downstream 1.0kb downstream 1000 false Chr12: 32108169-32109168 Glycine max
Glyma.12G166600 2.0kb upstream 2.0kb upstream 5571 true Chr12: 32109169-32114739 Glycine max
Glyma.12G166600 2.0kb upstream 2.0kb upstream 2000 false Chr12: 32112740-32114739 Glycine max
Glyma.12G166600 2.0kb downstream 2.0kb downstream 5571 true Chr12: 32107169-32112739 Glycine max
Glyma.12G166600 2.0kb downstream 2.0kb downstream 2000 false Chr12: 32107169-32109168 Glycine max
Glyma.12G166600 5.0kb upstream 5.0kb upstream 8571 true Chr12: 32109169-32117739 Glycine max
Glyma.12G166600 5.0kb upstream 5.0kb upstream 5000 false Chr12: 32112740-32117739 Glycine max
Glyma.12G166600 5.0kb downstream 5.0kb downstream 8571 true Chr12: 32104169-32112739 Glycine max
Glyma.12G166600 5.0kb downstream 5.0kb downstream 5000 false Chr12: 32104169-32109168 Glycine max
Glyma.12G166600 10.0kb upstream 10.0kb upstream 13571 true Chr12: 32109169-32122739 Glycine max
Glyma.12G166600 10.0kb upstream 10.0kb upstream 10000 false Chr12: 32112740-32122739 Glycine max
Glyma.12G166600 10.0kb downstream 10.0kb downstream 13571 true Chr12: 32099169-32112739 Glycine max
Glyma.12G166600 10.0kb downstream 10.0kb downstream 10000 false Chr12: 32099169-32109168 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304872 5265 Fabidae View MSA
124063488 5270 Rosid View MSA
123741215 5271 Pentapetalae View MSA
122770018 5272 Eudicot View MSA
122050944 5273 Angiosperm View MSA
121312214 5274 Embryophyte View MSA
123349408 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0645587 0.0 0.270375 Low Low
cufflinks 3.49333 0.0 20.4213    
cufflinks 0.195359 0.0 1.4249 Low  
cufflinks 0.853799 0.0 6.23756    
cufflinks 2.8267 0.0 18.851    
cufflinks 0.322563 0.0 2.14381    
cufflinks 0.174096 0.0 1.25716 Low  
cufflinks 9.92447 0.0 51.5306   High
cufflinks 1.84777 0.0 12.1047    
cufflinks 0.614       High
cufflinks 0.011     Low Low
cufflinks 0.053     Low  
cufflinks 0.279       High
cufflinks 0.32       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.042     Low  
cufflinks 0.035     Low  
cufflinks 0.052     Low  
cufflinks 0.161        
cufflinks 0.029     Low  
cufflinks 0.012     Low Low
cufflinks 0.065     Low  
cufflinks 0.03     Low  
cufflinks 0.01     Low Low
cufflinks 0.041     Low  
cufflinks 0.007     Low Low

0 Strain