Gene : Glyma.12G166900 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR22880:SF174 - DNA-BINDING BROMODOMAIN-CONTAINING PROTEIN Genomic Order:  1669
Name:  ? Glyma.12G166900 Secondary Identifier:  ? PAC:30545737
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G166900 0.5kb upstream 0.5kb upstream 4411 true Chr12: 32148811-32153221 Glycine max
Glyma.12G166900 0.5kb upstream 0.5kb upstream 500 false Chr12: 32148811-32149310 Glycine max
Glyma.12G166900 0.5kb downstream 0.5kb downstream 4411 true Chr12: 32149311-32153721 Glycine max
Glyma.12G166900 0.5kb downstream 0.5kb downstream 500 false Chr12: 32153222-32153721 Glycine max
Glyma.12G166900 1.0kb upstream 1.0kb upstream 4911 true Chr12: 32148311-32153221 Glycine max
Glyma.12G166900 1.0kb upstream 1.0kb upstream 1000 false Chr12: 32148311-32149310 Glycine max
Glyma.12G166900 1.0kb downstream 1.0kb downstream 4911 true Chr12: 32149311-32154221 Glycine max
Glyma.12G166900 1.0kb downstream 1.0kb downstream 1000 false Chr12: 32153222-32154221 Glycine max
Glyma.12G166900 2.0kb upstream 2.0kb upstream 5911 true Chr12: 32147311-32153221 Glycine max
Glyma.12G166900 2.0kb upstream 2.0kb upstream 2000 false Chr12: 32147311-32149310 Glycine max
Glyma.12G166900 2.0kb downstream 2.0kb downstream 5911 true Chr12: 32149311-32155221 Glycine max
Glyma.12G166900 2.0kb downstream 2.0kb downstream 2000 false Chr12: 32153222-32155221 Glycine max
Glyma.12G166900 5.0kb upstream 5.0kb upstream 8911 true Chr12: 32144311-32153221 Glycine max
Glyma.12G166900 5.0kb upstream 5.0kb upstream 5000 false Chr12: 32144311-32149310 Glycine max
Glyma.12G166900 5.0kb downstream 5.0kb downstream 8911 true Chr12: 32149311-32158221 Glycine max
Glyma.12G166900 5.0kb downstream 5.0kb downstream 5000 false Chr12: 32153222-32158221 Glycine max
Glyma.12G166900 10.0kb upstream 10.0kb upstream 13911 true Chr12: 32139311-32153221 Glycine max
Glyma.12G166900 10.0kb upstream 10.0kb upstream 10000 false Chr12: 32139311-32149310 Glycine max
Glyma.12G166900 10.0kb downstream 10.0kb downstream 13911 true Chr12: 32149311-32163221 Glycine max
Glyma.12G166900 10.0kb downstream 10.0kb downstream 10000 false Chr12: 32153222-32163221 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304371 5265 Fabidae View MSA
124069417 5270 Rosid View MSA
123752980 5271 Pentapetalae View MSA
122795275 5272 Eudicot View MSA
122044114 5273 Angiosperm View MSA
123429103 5275 Viridiplantae View MSA
121348064 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.29454 0.0 29.929    
cufflinks 9.78984 0.0 34.6886    
cufflinks 8.85009 0.0 31.4668    
cufflinks 8.40097 0.0 30.3662    
cufflinks 6.24078 0.0 23.3639   Low
cufflinks 7.21132 0.0 26.6403    
cufflinks 9.82953 0.0 34.952    
cufflinks 10.3341 0.0 35.7551   High
cufflinks 7.41923 0.0 27.1178    
cufflinks 1.85        
cufflinks 1.505        
cufflinks 2.353        
cufflinks 1.695        
cufflinks 1.881        
cufflinks 1.633        
cufflinks 2.32        
cufflinks 0.909       Low
cufflinks 1.992        
cufflinks 2.375        
cufflinks 2.434       High
cufflinks 1.298       Low
cufflinks 2.341        
cufflinks 2.229        
cufflinks 1.578        
cufflinks 2.148        
cufflinks 1.5        

0 Strain