Gene : Glyma.12G169400 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR19370:SF120 - FERREDOXIN-1, CHLOROPLASTIC-RELATED Genomic Order:  1694
Name:  ? Glyma.12G169400 Secondary Identifier:  ? PAC:30545778
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G169400 0.5kb upstream 0.5kb upstream 1622 true Chr12: 32440613-32442234 Glycine max
Glyma.12G169400 0.5kb upstream 0.5kb upstream 500 false Chr12: 32441735-32442234 Glycine max
Glyma.12G169400 0.5kb downstream 0.5kb downstream 1622 true Chr12: 32440113-32441734 Glycine max
Glyma.12G169400 0.5kb downstream 0.5kb downstream 500 false Chr12: 32440113-32440612 Glycine max
Glyma.12G169400 1.0kb upstream 1.0kb upstream 2122 true Chr12: 32440613-32442734 Glycine max
Glyma.12G169400 1.0kb upstream 1.0kb upstream 1000 false Chr12: 32441735-32442734 Glycine max
Glyma.12G169400 1.0kb downstream 1.0kb downstream 2122 true Chr12: 32439613-32441734 Glycine max
Glyma.12G169400 1.0kb downstream 1.0kb downstream 1000 false Chr12: 32439613-32440612 Glycine max
Glyma.12G169400 2.0kb upstream 2.0kb upstream 3122 true Chr12: 32440613-32443734 Glycine max
Glyma.12G169400 2.0kb upstream 2.0kb upstream 2000 false Chr12: 32441735-32443734 Glycine max
Glyma.12G169400 2.0kb downstream 2.0kb downstream 3122 true Chr12: 32438613-32441734 Glycine max
Glyma.12G169400 2.0kb downstream 2.0kb downstream 2000 false Chr12: 32438613-32440612 Glycine max
Glyma.12G169400 5.0kb upstream 5.0kb upstream 6122 true Chr12: 32440613-32446734 Glycine max
Glyma.12G169400 5.0kb upstream 5.0kb upstream 5000 false Chr12: 32441735-32446734 Glycine max
Glyma.12G169400 5.0kb downstream 5.0kb downstream 6122 true Chr12: 32435613-32441734 Glycine max
Glyma.12G169400 5.0kb downstream 5.0kb downstream 5000 false Chr12: 32435613-32440612 Glycine max
Glyma.12G169400 10.0kb upstream 10.0kb upstream 11122 true Chr12: 32440613-32451734 Glycine max
Glyma.12G169400 10.0kb upstream 10.0kb upstream 10000 false Chr12: 32441735-32451734 Glycine max
Glyma.12G169400 10.0kb downstream 10.0kb downstream 11122 true Chr12: 32430613-32441734 Glycine max
Glyma.12G169400 10.0kb downstream 10.0kb downstream 10000 false Chr12: 32430613-32440612 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313660 5265 Fabidae View MSA
124069185 5270 Rosid View MSA
123748540 5271 Pentapetalae View MSA
122797784 5272 Eudicot View MSA
122047463 5273 Angiosperm View MSA
123429005 5275 Viridiplantae View MSA
121350651 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.1643 0.0 39.0381   High
cufflinks 8.61793 0.0 25.0451   High
cufflinks 1.2342 0.0 4.46208    
cufflinks 0.206663 0.0 0.812795   Low
cufflinks 0.972786 0.0 3.57231    
cufflinks 0.438951 0.0 1.67455    
cufflinks 7.7098 0.0 22.71    
cufflinks 0.105335 0.0 0.42493 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 3.546        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.462        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.016     Low Low
cufflinks 179.903     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.533        
cufflinks 5.413        
cufflinks 147.534     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 131.14     High  
cufflinks 125.586     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 200.658     High  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain