Gene : Glyma.12G170100 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR12832 - TESTIS-SPECIFIC PROTEIN PBS13 T-COMPLEX 11 Genomic Order:  1701
Name:  ? Glyma.12G170100 Secondary Identifier:  ? PAC:30547887
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G170100 0.5kb upstream 0.5kb upstream 7990 true Chr12: 32492960-32500949 Glycine max
Glyma.12G170100 0.5kb upstream 0.5kb upstream 500 false Chr12: 32500450-32500949 Glycine max
Glyma.12G170100 0.5kb downstream 0.5kb downstream 7990 true Chr12: 32492460-32500449 Glycine max
Glyma.12G170100 0.5kb downstream 0.5kb downstream 500 false Chr12: 32492460-32492959 Glycine max
Glyma.12G170100 1.0kb upstream 1.0kb upstream 8490 true Chr12: 32492960-32501449 Glycine max
Glyma.12G170100 1.0kb upstream 1.0kb upstream 1000 false Chr12: 32500450-32501449 Glycine max
Glyma.12G170100 1.0kb downstream 1.0kb downstream 8490 true Chr12: 32491960-32500449 Glycine max
Glyma.12G170100 1.0kb downstream 1.0kb downstream 1000 false Chr12: 32491960-32492959 Glycine max
Glyma.12G170100 2.0kb upstream 2.0kb upstream 9490 true Chr12: 32492960-32502449 Glycine max
Glyma.12G170100 2.0kb upstream 2.0kb upstream 2000 false Chr12: 32500450-32502449 Glycine max
Glyma.12G170100 2.0kb downstream 2.0kb downstream 9490 true Chr12: 32490960-32500449 Glycine max
Glyma.12G170100 2.0kb downstream 2.0kb downstream 2000 false Chr12: 32490960-32492959 Glycine max
Glyma.12G170100 5.0kb upstream 5.0kb upstream 12490 true Chr12: 32492960-32505449 Glycine max
Glyma.12G170100 5.0kb upstream 5.0kb upstream 5000 false Chr12: 32500450-32505449 Glycine max
Glyma.12G170100 5.0kb downstream 5.0kb downstream 12490 true Chr12: 32487960-32500449 Glycine max
Glyma.12G170100 5.0kb downstream 5.0kb downstream 5000 false Chr12: 32487960-32492959 Glycine max
Glyma.12G170100 10.0kb upstream 10.0kb upstream 17490 true Chr12: 32492960-32510449 Glycine max
Glyma.12G170100 10.0kb upstream 10.0kb upstream 10000 false Chr12: 32500450-32510449 Glycine max
Glyma.12G170100 10.0kb downstream 10.0kb downstream 17490 true Chr12: 32482960-32500449 Glycine max
Glyma.12G170100 10.0kb downstream 10.0kb downstream 10000 false Chr12: 32482960-32492959 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308652 5265 Fabidae View MSA
124065811 5270 Rosid View MSA
123746081 5271 Pentapetalae View MSA
122792060 5272 Eudicot View MSA
122043242 5273 Angiosperm View MSA
121345323 5274 Embryophyte View MSA
123426758 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.9351 0.0 62.0953    
cufflinks 13.5018 0.0 40.7081    
cufflinks 26.1213 0.0 81.2356 High High
cufflinks 12.8656 0.0 41.9604    
cufflinks 7.31546 0.0 22.0487   Low
cufflinks 32.9216 0.0 106.782 High High
cufflinks 5.48085 0.0 16.3945   Low
cufflinks 15.7298 0.0 53.0521    
cufflinks 11.9262 0.0 38.1515    
cufflinks 7.766     High  
cufflinks 11.999     High  
cufflinks 15.979     High  
cufflinks 5.997       Low
cufflinks 2.9       Low
cufflinks 13.778     High  
cufflinks 11.774     High  
cufflinks 7.226     High  
cufflinks 13.674     High  
cufflinks 14.319     High  
cufflinks 12.325     High  
cufflinks 9.327     High  
cufflinks 14.51     High  
cufflinks 10.682     High  
cufflinks 14.975     High  
cufflinks 12.979     High  
cufflinks 11.47     High  

0 Strain