Gene : Glyma.12G160300 G. max Wm82.a2.v1
Defline:  (1 of 3) PF07460 - NUMOD3 motif (2 copies) (NUMOD3) Genomic Order:  1603
Name:  ? Glyma.12G160300 Secondary Identifier:  ? PAC:30547161
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G160300 0.5kb upstream 0.5kb upstream 4725 true Chr12: 28453641-28458365 Glycine max
Glyma.12G160300 0.5kb upstream 0.5kb upstream 500 false Chr12: 28453641-28454140 Glycine max
Glyma.12G160300 0.5kb downstream 0.5kb downstream 4725 true Chr12: 28454141-28458865 Glycine max
Glyma.12G160300 0.5kb downstream 0.5kb downstream 500 false Chr12: 28458366-28458865 Glycine max
Glyma.12G160300 1.0kb upstream 1.0kb upstream 5225 true Chr12: 28453141-28458365 Glycine max
Glyma.12G160300 1.0kb upstream 1.0kb upstream 1000 false Chr12: 28453141-28454140 Glycine max
Glyma.12G160300 1.0kb downstream 1.0kb downstream 5225 true Chr12: 28454141-28459365 Glycine max
Glyma.12G160300 1.0kb downstream 1.0kb downstream 1000 false Chr12: 28458366-28459365 Glycine max
Glyma.12G160300 2.0kb upstream 2.0kb upstream 6225 true Chr12: 28452141-28458365 Glycine max
Glyma.12G160300 2.0kb upstream 2.0kb upstream 2000 false Chr12: 28452141-28454140 Glycine max
Glyma.12G160300 2.0kb downstream 2.0kb downstream 6225 true Chr12: 28454141-28460365 Glycine max
Glyma.12G160300 2.0kb downstream 2.0kb downstream 2000 false Chr12: 28458366-28460365 Glycine max
Glyma.12G160300 5.0kb upstream 5.0kb upstream 9225 true Chr12: 28449141-28458365 Glycine max
Glyma.12G160300 5.0kb upstream 5.0kb upstream 5000 false Chr12: 28449141-28454140 Glycine max
Glyma.12G160300 5.0kb downstream 5.0kb downstream 9225 true Chr12: 28454141-28463365 Glycine max
Glyma.12G160300 5.0kb downstream 5.0kb downstream 5000 false Chr12: 28458366-28463365 Glycine max
Glyma.12G160300 10.0kb upstream 10.0kb upstream 14225 true Chr12: 28444141-28458365 Glycine max
Glyma.12G160300 10.0kb upstream 10.0kb upstream 10000 false Chr12: 28444141-28454140 Glycine max
Glyma.12G160300 10.0kb downstream 10.0kb downstream 14225 true Chr12: 28454141-28468365 Glycine max
Glyma.12G160300 10.0kb downstream 10.0kb downstream 10000 false Chr12: 28458366-28468365 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313694 5265 Fabidae View MSA
124067823 5270 Rosid View MSA
123741398 5271 Pentapetalae View MSA
122790340 5272 Eudicot View MSA
122047787 5273 Angiosperm View MSA
121349375 5274 Embryophyte View MSA
123428133 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.8051 0.0 16.1586   High
cufflinks 5.06898 0.0 14.2766   High
cufflinks 0.887479 0.0 3.10054    
cufflinks 1.37526 0.0 4.59591    
cufflinks 1.23692 0.0 4.20747    
cufflinks 0.946239 0.0 3.30405    
cufflinks 2.25603 0.0 7.08679    
cufflinks 1.37906 0.0 4.60787    
cufflinks 1.00853 0.0 3.49672    
cufflinks 1.486        
cufflinks 0.333        
cufflinks 1.141        
cufflinks 0.517        
cufflinks 0.802        
cufflinks 0.537        
cufflinks 7.091       High
cufflinks 0.072       Low
cufflinks 1.313        
cufflinks 2.404        
cufflinks 9.378     High High
cufflinks 0.224       Low
cufflinks 7.558     High High
cufflinks 5.284       High
cufflinks 0.195       Low
cufflinks 8.382     High High
cufflinks 0.246        

0 Strain