Gene : Glyma.12G161400 G. max Wm82.a2.v1
Defline:  (1 of 30) 1.6.5.2 - NAD(P)H dehydrogenase (quinone) / Vitamin-K reductase Genomic Order:  1614
Name:  ? Glyma.12G161400 Secondary Identifier:  ? PAC:30546428
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7279 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G161400 0.5kb upstream 0.5kb upstream 2684 true Chr12: 30081759-30084442 Glycine max
Glyma.12G161400 0.5kb upstream 0.5kb upstream 500 false Chr12: 30081759-30082258 Glycine max
Glyma.12G161400 0.5kb downstream 0.5kb downstream 2684 true Chr12: 30082259-30084942 Glycine max
Glyma.12G161400 0.5kb downstream 0.5kb downstream 500 false Chr12: 30084443-30084942 Glycine max
Glyma.12G161400 1.0kb upstream 1.0kb upstream 3184 true Chr12: 30081259-30084442 Glycine max
Glyma.12G161400 1.0kb upstream 1.0kb upstream 1000 false Chr12: 30081259-30082258 Glycine max
Glyma.12G161400 1.0kb downstream 1.0kb downstream 3184 true Chr12: 30082259-30085442 Glycine max
Glyma.12G161400 1.0kb downstream 1.0kb downstream 1000 false Chr12: 30084443-30085442 Glycine max
Glyma.12G161400 2.0kb upstream 2.0kb upstream 4184 true Chr12: 30080259-30084442 Glycine max
Glyma.12G161400 2.0kb upstream 2.0kb upstream 2000 false Chr12: 30080259-30082258 Glycine max
Glyma.12G161400 2.0kb downstream 2.0kb downstream 4184 true Chr12: 30082259-30086442 Glycine max
Glyma.12G161400 2.0kb downstream 2.0kb downstream 2000 false Chr12: 30084443-30086442 Glycine max
Glyma.12G161400 5.0kb upstream 5.0kb upstream 7184 true Chr12: 30077259-30084442 Glycine max
Glyma.12G161400 5.0kb upstream 5.0kb upstream 5000 false Chr12: 30077259-30082258 Glycine max
Glyma.12G161400 5.0kb downstream 5.0kb downstream 7184 true Chr12: 30082259-30089442 Glycine max
Glyma.12G161400 5.0kb downstream 5.0kb downstream 5000 false Chr12: 30084443-30089442 Glycine max
Glyma.12G161400 10.0kb upstream 10.0kb upstream 12184 true Chr12: 30072259-30084442 Glycine max
Glyma.12G161400 10.0kb upstream 10.0kb upstream 10000 false Chr12: 30072259-30082258 Glycine max
Glyma.12G161400 10.0kb downstream 10.0kb downstream 12184 true Chr12: 30082259-30094442 Glycine max
Glyma.12G161400 10.0kb downstream 10.0kb downstream 10000 false Chr12: 30084443-30094442 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297146 5265 Fabidae View MSA
124066507 5270 Rosid View MSA
123752194 5271 Pentapetalae View MSA
122789717 5272 Eudicot View MSA
122045410 5273 Angiosperm View MSA
121349391 5274 Embryophyte View MSA
123428089 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.17862 0.0 4.29202    
cufflinks 0.522547 0.0 1.98228    
cufflinks 8.56673 0.0 24.8933   High
cufflinks 0.0119838 0.0 0.0576185 Low Low
cufflinks 1.38714 0.0 4.99781    
cufflinks 4.65068 0.0 14.7757   High
cufflinks 0.192032 0.0 0.758297 Low  
cufflinks 0.0430855 0.0 0.183725 Low Low
cufflinks 0.930619 0.0 3.43369    
cufflinks 0.154        
cufflinks 0.248        
cufflinks 1.954       High
cufflinks 0.207        
cufflinks 0.039     Low  
cufflinks 0.215        
cufflinks 0.082     Low  
cufflinks 1.25       High
cufflinks 0.067     Low  
cufflinks 0.319        
cufflinks 0.009     Low Low
cufflinks 0.069        
cufflinks 0.063     Low  
cufflinks 0.03     Low Low
cufflinks 0.26        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.932       High

0 Strain