Gene : Glyma.12G147400 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR23180:SF160 - PROTEIN W09D10.1 Genomic Order:  1474
Name:  ? Glyma.12G147400 Secondary Identifier:  ? PAC:30547066
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G147400 0.5kb upstream 0.5kb upstream 7080 true Chr12: 20541899-20548978 Glycine max
Glyma.12G147400 0.5kb upstream 0.5kb upstream 500 false Chr12: 20548479-20548978 Glycine max
Glyma.12G147400 0.5kb downstream 0.5kb downstream 7080 true Chr12: 20541399-20548478 Glycine max
Glyma.12G147400 0.5kb downstream 0.5kb downstream 500 false Chr12: 20541399-20541898 Glycine max
Glyma.12G147400 1.0kb upstream 1.0kb upstream 7580 true Chr12: 20541899-20549478 Glycine max
Glyma.12G147400 1.0kb upstream 1.0kb upstream 1000 false Chr12: 20548479-20549478 Glycine max
Glyma.12G147400 1.0kb downstream 1.0kb downstream 7580 true Chr12: 20540899-20548478 Glycine max
Glyma.12G147400 1.0kb downstream 1.0kb downstream 1000 false Chr12: 20540899-20541898 Glycine max
Glyma.12G147400 2.0kb upstream 2.0kb upstream 8580 true Chr12: 20541899-20550478 Glycine max
Glyma.12G147400 2.0kb upstream 2.0kb upstream 2000 false Chr12: 20548479-20550478 Glycine max
Glyma.12G147400 2.0kb downstream 2.0kb downstream 8580 true Chr12: 20539899-20548478 Glycine max
Glyma.12G147400 2.0kb downstream 2.0kb downstream 2000 false Chr12: 20539899-20541898 Glycine max
Glyma.12G147400 5.0kb upstream 5.0kb upstream 11580 true Chr12: 20541899-20553478 Glycine max
Glyma.12G147400 5.0kb upstream 5.0kb upstream 5000 false Chr12: 20548479-20553478 Glycine max
Glyma.12G147400 5.0kb downstream 5.0kb downstream 11580 true Chr12: 20536899-20548478 Glycine max
Glyma.12G147400 5.0kb downstream 5.0kb downstream 5000 false Chr12: 20536899-20541898 Glycine max
Glyma.12G147400 10.0kb upstream 10.0kb upstream 16580 true Chr12: 20541899-20558478 Glycine max
Glyma.12G147400 10.0kb upstream 10.0kb upstream 10000 false Chr12: 20548479-20558478 Glycine max
Glyma.12G147400 10.0kb downstream 10.0kb downstream 16580 true Chr12: 20531899-20548478 Glycine max
Glyma.12G147400 10.0kb downstream 10.0kb downstream 10000 false Chr12: 20531899-20541898 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310661 5265 Fabidae View MSA
124068745 5270 Rosid View MSA
123743819 5271 Pentapetalae View MSA
122788414 5272 Eudicot View MSA
122045420 5273 Angiosperm View MSA
121346891 5274 Embryophyte View MSA
123428144 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.9201 0.0 61.7706   High
cufflinks 7.4477 0.0 27.0232   Low
cufflinks 19.0541 0.0 66.2559   High
cufflinks 11.4629 0.0 39.8566    
cufflinks 12.3692 0.0 42.5446    
cufflinks 15.877 0.0 54.6289    
cufflinks 12.4735 0.0 43.5272    
cufflinks 11.7534 0.0 40.7441    
cufflinks 11.1999 0.0 38.8695    
cufflinks 1.837        
cufflinks 3.351       High
cufflinks 1.801        
cufflinks 2.295        
cufflinks 1.513       Low
cufflinks 2.097        
cufflinks 2.386        
cufflinks 1.811        
cufflinks 2.34        
cufflinks 1.505       Low
cufflinks 2.399        
cufflinks 3.651       High
cufflinks 2.339        
cufflinks 1.679       Low
cufflinks 4.181       High
cufflinks 2.171        
cufflinks 2.536        

0 Strain