Gene : Glyma.12G150000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10178//PTHR10178:SF8 - GAG/POL/ENV POLYPROTEIN // UNCHARACTERIZED Genomic Order:  1500
Name:  ? Glyma.12G150000 Secondary Identifier:  ? PAC:30546956
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G150000 0.5kb upstream 0.5kb upstream 1408 true Chr12: 21441146-21442553 Glycine max
Glyma.12G150000 0.5kb upstream 0.5kb upstream 500 false Chr12: 21442054-21442553 Glycine max
Glyma.12G150000 0.5kb downstream 0.5kb downstream 1408 true Chr12: 21440646-21442053 Glycine max
Glyma.12G150000 0.5kb downstream 0.5kb downstream 500 false Chr12: 21440646-21441145 Glycine max
Glyma.12G150000 1.0kb upstream 1.0kb upstream 1908 true Chr12: 21441146-21443053 Glycine max
Glyma.12G150000 1.0kb upstream 1.0kb upstream 1000 false Chr12: 21442054-21443053 Glycine max
Glyma.12G150000 1.0kb downstream 1.0kb downstream 1908 true Chr12: 21440146-21442053 Glycine max
Glyma.12G150000 1.0kb downstream 1.0kb downstream 1000 false Chr12: 21440146-21441145 Glycine max
Glyma.12G150000 2.0kb upstream 2.0kb upstream 2908 true Chr12: 21441146-21444053 Glycine max
Glyma.12G150000 2.0kb upstream 2.0kb upstream 2000 false Chr12: 21442054-21444053 Glycine max
Glyma.12G150000 2.0kb downstream 2.0kb downstream 2908 true Chr12: 21439146-21442053 Glycine max
Glyma.12G150000 2.0kb downstream 2.0kb downstream 2000 false Chr12: 21439146-21441145 Glycine max
Glyma.12G150000 5.0kb upstream 5.0kb upstream 5908 true Chr12: 21441146-21447053 Glycine max
Glyma.12G150000 5.0kb upstream 5.0kb upstream 5000 false Chr12: 21442054-21447053 Glycine max
Glyma.12G150000 5.0kb downstream 5.0kb downstream 5908 true Chr12: 21436146-21442053 Glycine max
Glyma.12G150000 5.0kb downstream 5.0kb downstream 5000 false Chr12: 21436146-21441145 Glycine max
Glyma.12G150000 10.0kb upstream 10.0kb upstream 10908 true Chr12: 21441146-21452053 Glycine max
Glyma.12G150000 10.0kb upstream 10.0kb upstream 10000 false Chr12: 21442054-21452053 Glycine max
Glyma.12G150000 10.0kb downstream 10.0kb downstream 10908 true Chr12: 21431146-21442053 Glycine max
Glyma.12G150000 10.0kb downstream 10.0kb downstream 10000 false Chr12: 21431146-21441145 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028911 5273 Angiosperm View MSA
122250698 5265 Fabidae View MSA
124074879 5270 Rosid View MSA
123628692 5271 Pentapetalae View MSA
122662949 5272 Eudicot View MSA
121298339 5274 Embryophyte View MSA
123336316 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain