Gene : Glyma.12G150900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR31867:SF24 - EXPANSIN-A12 Genomic Order:  1509
Name:  ? Glyma.12G150900 Secondary Identifier:  ? PAC:30546337
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G150900 0.5kb upstream 0.5kb upstream 3924 true Chr12: 21702541-21706464 Glycine max
Glyma.12G150900 0.5kb upstream 0.5kb upstream 500 false Chr12: 21705965-21706464 Glycine max
Glyma.12G150900 0.5kb downstream 0.5kb downstream 3924 true Chr12: 21702041-21705964 Glycine max
Glyma.12G150900 0.5kb downstream 0.5kb downstream 500 false Chr12: 21702041-21702540 Glycine max
Glyma.12G150900 1.0kb upstream 1.0kb upstream 4424 true Chr12: 21702541-21706964 Glycine max
Glyma.12G150900 1.0kb upstream 1.0kb upstream 1000 false Chr12: 21705965-21706964 Glycine max
Glyma.12G150900 1.0kb downstream 1.0kb downstream 4424 true Chr12: 21701541-21705964 Glycine max
Glyma.12G150900 1.0kb downstream 1.0kb downstream 1000 false Chr12: 21701541-21702540 Glycine max
Glyma.12G150900 2.0kb upstream 2.0kb upstream 5424 true Chr12: 21702541-21707964 Glycine max
Glyma.12G150900 2.0kb upstream 2.0kb upstream 2000 false Chr12: 21705965-21707964 Glycine max
Glyma.12G150900 2.0kb downstream 2.0kb downstream 5424 true Chr12: 21700541-21705964 Glycine max
Glyma.12G150900 2.0kb downstream 2.0kb downstream 2000 false Chr12: 21700541-21702540 Glycine max
Glyma.12G150900 5.0kb upstream 5.0kb upstream 8424 true Chr12: 21702541-21710964 Glycine max
Glyma.12G150900 5.0kb upstream 5.0kb upstream 5000 false Chr12: 21705965-21710964 Glycine max
Glyma.12G150900 5.0kb downstream 5.0kb downstream 8424 true Chr12: 21697541-21705964 Glycine max
Glyma.12G150900 5.0kb downstream 5.0kb downstream 5000 false Chr12: 21697541-21702540 Glycine max
Glyma.12G150900 10.0kb upstream 10.0kb upstream 13424 true Chr12: 21702541-21715964 Glycine max
Glyma.12G150900 10.0kb upstream 10.0kb upstream 10000 false Chr12: 21705965-21715964 Glycine max
Glyma.12G150900 10.0kb downstream 10.0kb downstream 13424 true Chr12: 21692541-21705964 Glycine max
Glyma.12G150900 10.0kb downstream 10.0kb downstream 10000 false Chr12: 21692541-21702540 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309204 5265 Fabidae View MSA
124070528 5270 Rosid View MSA
123753539 5271 Pentapetalae View MSA
122795213 5272 Eudicot View MSA
122043079 5273 Angiosperm View MSA
123429074 5275 Viridiplantae View MSA
121351680 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0344871 0.0 0.146966 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.161183 0.0 0.634615 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.951268 0.0 3.45583    
cufflinks 1.48903 0.0 5.24421    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.187398 0.0 0.73412 Low  
cufflinks 1.69957 0.0 5.91367    
cufflinks 1.989       High
cufflinks 0.162        
cufflinks 0.036     Low  
cufflinks 2.326       High
cufflinks 4.062       High
cufflinks 0.197        
cufflinks 0.016     Low  
cufflinks 0.185        
cufflinks 0.048     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low Low
cufflinks 0.176        
cufflinks 0.005     Low Low
cufflinks 0.024     Low  
cufflinks 0.072        
cufflinks 0.013     Low Low
cufflinks 0.78        

0 Strain