Gene : Glyma.12G153600 G. max Wm82.a2.v1
Defline:  (1 of 75) PF05678 - VQ motif (VQ) Genomic Order:  1536
Name:  ? Glyma.12G153600 Secondary Identifier:  ? PAC:30545503
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G153600 0.5kb upstream 0.5kb upstream 2111 true Chr12: 23455875-23457985 Glycine max
Glyma.12G153600 0.5kb upstream 0.5kb upstream 500 false Chr12: 23457486-23457985 Glycine max
Glyma.12G153600 0.5kb downstream 0.5kb downstream 2111 true Chr12: 23455375-23457485 Glycine max
Glyma.12G153600 0.5kb downstream 0.5kb downstream 500 false Chr12: 23455375-23455874 Glycine max
Glyma.12G153600 1.0kb upstream 1.0kb upstream 2611 true Chr12: 23455875-23458485 Glycine max
Glyma.12G153600 1.0kb upstream 1.0kb upstream 1000 false Chr12: 23457486-23458485 Glycine max
Glyma.12G153600 1.0kb downstream 1.0kb downstream 2611 true Chr12: 23454875-23457485 Glycine max
Glyma.12G153600 1.0kb downstream 1.0kb downstream 1000 false Chr12: 23454875-23455874 Glycine max
Glyma.12G153600 2.0kb upstream 2.0kb upstream 3611 true Chr12: 23455875-23459485 Glycine max
Glyma.12G153600 2.0kb upstream 2.0kb upstream 2000 false Chr12: 23457486-23459485 Glycine max
Glyma.12G153600 2.0kb downstream 2.0kb downstream 3611 true Chr12: 23453875-23457485 Glycine max
Glyma.12G153600 2.0kb downstream 2.0kb downstream 2000 false Chr12: 23453875-23455874 Glycine max
Glyma.12G153600 5.0kb upstream 5.0kb upstream 6611 true Chr12: 23455875-23462485 Glycine max
Glyma.12G153600 5.0kb upstream 5.0kb upstream 5000 false Chr12: 23457486-23462485 Glycine max
Glyma.12G153600 5.0kb downstream 5.0kb downstream 6611 true Chr12: 23450875-23457485 Glycine max
Glyma.12G153600 5.0kb downstream 5.0kb downstream 5000 false Chr12: 23450875-23455874 Glycine max
Glyma.12G153600 10.0kb upstream 10.0kb upstream 11611 true Chr12: 23455875-23467485 Glycine max
Glyma.12G153600 10.0kb upstream 10.0kb upstream 10000 false Chr12: 23457486-23467485 Glycine max
Glyma.12G153600 10.0kb downstream 10.0kb downstream 11611 true Chr12: 23445875-23457485 Glycine max
Glyma.12G153600 10.0kb downstream 10.0kb downstream 10000 false Chr12: 23445875-23455874 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311492 5265 Fabidae View MSA
124073802 5270 Rosid View MSA
123750842 5271 Pentapetalae View MSA
122795090 5272 Eudicot View MSA
122046673 5273 Angiosperm View MSA
121347985 5274 Embryophyte View MSA
123380701 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.89588 0.0 19.1587    
cufflinks 6.39825 0.0 23.1232    
cufflinks 1.0148 0.0 5.96412   Low
cufflinks 3.13384 0.0 13.9207    
cufflinks 6.21722 0.0 24.7186    
cufflinks 3.45993 0.0 15.143    
cufflinks 1.62434 0.0 8.80461   Low
cufflinks 4.6 0.0 17.9646    
cufflinks 7.27489 0.0 27.4626   High
cufflinks 1.771        
cufflinks 0.332       Low
cufflinks 0.752        
cufflinks 2.914       High
cufflinks 2.581       High
cufflinks 0.854        
cufflinks 0.98        
cufflinks 0.201       Low
cufflinks 1.494        
cufflinks 3.014       High
cufflinks 0.933        
cufflinks 0.312       Low
cufflinks 1.251        
cufflinks 1.413        
cufflinks 0.551        
cufflinks 1.232        
cufflinks 0.426        

0 Strain