Gene : Glyma.12G155300 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR11403 - CYTOCHROME C OXIDASE SUBUNIT III Genomic Order:  1553
Name:  ? Glyma.12G155300 Secondary Identifier:  ? PAC:30546333
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-3781 Glycine max pathologic  
Gmax PWY-7279 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G155300 0.5kb upstream 0.5kb upstream 2338 true Chr12: 24277539-24279876 Glycine max
Glyma.12G155300 0.5kb upstream 0.5kb upstream 500 false Chr12: 24279377-24279876 Glycine max
Glyma.12G155300 0.5kb downstream 0.5kb downstream 2338 true Chr12: 24277039-24279376 Glycine max
Glyma.12G155300 0.5kb downstream 0.5kb downstream 500 false Chr12: 24277039-24277538 Glycine max
Glyma.12G155300 1.0kb upstream 1.0kb upstream 2838 true Chr12: 24277539-24280376 Glycine max
Glyma.12G155300 1.0kb upstream 1.0kb upstream 1000 false Chr12: 24279377-24280376 Glycine max
Glyma.12G155300 1.0kb downstream 1.0kb downstream 2838 true Chr12: 24276539-24279376 Glycine max
Glyma.12G155300 1.0kb downstream 1.0kb downstream 1000 false Chr12: 24276539-24277538 Glycine max
Glyma.12G155300 2.0kb upstream 2.0kb upstream 3838 true Chr12: 24277539-24281376 Glycine max
Glyma.12G155300 2.0kb upstream 2.0kb upstream 2000 false Chr12: 24279377-24281376 Glycine max
Glyma.12G155300 2.0kb downstream 2.0kb downstream 3838 true Chr12: 24275539-24279376 Glycine max
Glyma.12G155300 2.0kb downstream 2.0kb downstream 2000 false Chr12: 24275539-24277538 Glycine max
Glyma.12G155300 5.0kb upstream 5.0kb upstream 6838 true Chr12: 24277539-24284376 Glycine max
Glyma.12G155300 5.0kb upstream 5.0kb upstream 5000 false Chr12: 24279377-24284376 Glycine max
Glyma.12G155300 5.0kb downstream 5.0kb downstream 6838 true Chr12: 24272539-24279376 Glycine max
Glyma.12G155300 5.0kb downstream 5.0kb downstream 5000 false Chr12: 24272539-24277538 Glycine max
Glyma.12G155300 10.0kb upstream 10.0kb upstream 11838 true Chr12: 24277539-24289376 Glycine max
Glyma.12G155300 10.0kb upstream 10.0kb upstream 10000 false Chr12: 24279377-24289376 Glycine max
Glyma.12G155300 10.0kb downstream 10.0kb downstream 11838 true Chr12: 24267539-24279376 Glycine max
Glyma.12G155300 10.0kb downstream 10.0kb downstream 10000 false Chr12: 24267539-24277538 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297957 5265 Fabidae View MSA
124037306 5270 Rosid View MSA
123753546 5271 Pentapetalae View MSA
122786162 5272 Eudicot View MSA
122050963 5273 Angiosperm View MSA
121348326 5274 Embryophyte View MSA
123426097 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.59082 0.0 2.17981   Low
cufflinks 2.45942 0.0 8.02179    
cufflinks 2.58046 0.0 8.33027    
cufflinks 7.80625 0.0 21.8284   High
cufflinks 4.10383 0.0 12.428    
cufflinks 2.08087 0.0 6.92187    
cufflinks 3.19484 0.0 10.0303    
cufflinks 1.57694 0.0 5.42693    
cufflinks 1.23932 0.0 4.35562    
cufflinks 3.607       High
cufflinks 1.262        
cufflinks 1.272        
cufflinks 1.551        
cufflinks 4.356       High
cufflinks 1.886        
cufflinks 0.913        
cufflinks 1.904        
cufflinks 1.747        
cufflinks 2.606        
cufflinks 1.321        
cufflinks 0.861        
cufflinks 1.386        
cufflinks 2.695       High
cufflinks 0.931        
cufflinks 1.176        
cufflinks 0.422       Low

0 Strain