Gene : Glyma.12G195800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR34126:SF1 - PEROXISOME BIOGENESIS PROTEIN 22 Genomic Order:  1958
Name:  ? Glyma.12G195800 Secondary Identifier:  ? PAC:30545594
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G195800 0.5kb upstream 0.5kb upstream 4800 true Chr12: 35714326-35719125 Glycine max
Glyma.12G195800 0.5kb upstream 0.5kb upstream 500 false Chr12: 35718626-35719125 Glycine max
Glyma.12G195800 0.5kb downstream 0.5kb downstream 4800 true Chr12: 35713826-35718625 Glycine max
Glyma.12G195800 0.5kb downstream 0.5kb downstream 500 false Chr12: 35713826-35714325 Glycine max
Glyma.12G195800 1.0kb upstream 1.0kb upstream 5300 true Chr12: 35714326-35719625 Glycine max
Glyma.12G195800 1.0kb upstream 1.0kb upstream 1000 false Chr12: 35718626-35719625 Glycine max
Glyma.12G195800 1.0kb downstream 1.0kb downstream 5300 true Chr12: 35713326-35718625 Glycine max
Glyma.12G195800 1.0kb downstream 1.0kb downstream 1000 false Chr12: 35713326-35714325 Glycine max
Glyma.12G195800 2.0kb upstream 2.0kb upstream 6300 true Chr12: 35714326-35720625 Glycine max
Glyma.12G195800 2.0kb upstream 2.0kb upstream 2000 false Chr12: 35718626-35720625 Glycine max
Glyma.12G195800 2.0kb downstream 2.0kb downstream 6300 true Chr12: 35712326-35718625 Glycine max
Glyma.12G195800 2.0kb downstream 2.0kb downstream 2000 false Chr12: 35712326-35714325 Glycine max
Glyma.12G195800 5.0kb upstream 5.0kb upstream 9300 true Chr12: 35714326-35723625 Glycine max
Glyma.12G195800 5.0kb upstream 5.0kb upstream 5000 false Chr12: 35718626-35723625 Glycine max
Glyma.12G195800 5.0kb downstream 5.0kb downstream 9300 true Chr12: 35709326-35718625 Glycine max
Glyma.12G195800 5.0kb downstream 5.0kb downstream 5000 false Chr12: 35709326-35714325 Glycine max
Glyma.12G195800 10.0kb upstream 10.0kb upstream 14300 true Chr12: 35714326-35728625 Glycine max
Glyma.12G195800 10.0kb upstream 10.0kb upstream 10000 false Chr12: 35718626-35728625 Glycine max
Glyma.12G195800 10.0kb downstream 10.0kb downstream 14300 true Chr12: 35704326-35718625 Glycine max
Glyma.12G195800 10.0kb downstream 10.0kb downstream 10000 false Chr12: 35704326-35714325 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306090 5265 Fabidae View MSA
124068410 5270 Rosid View MSA
123738995 5271 Pentapetalae View MSA
122796111 5272 Eudicot View MSA
122047341 5273 Angiosperm View MSA
121350809 5274 Embryophyte View MSA
123425554 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 32.6336 0.0 87.6732 High  
cufflinks 19.8621 0.0 53.0244   Low
cufflinks 33.6341 0.0 90.5974 High  
cufflinks 18.4736 0.0 49.3717   Low
cufflinks 30.1782 0.0 80.858 High  
cufflinks 45.3039 0.0 124.037 High High
cufflinks 22.4006 0.0 59.7628 High  
cufflinks 31.9705 0.0 85.9272 High  
cufflinks 27.7351 0.0 74.1861 High  
cufflinks 11.764     High  
cufflinks 7.379     High Low
cufflinks 9.829     High  
cufflinks 14.418     High High
cufflinks 15.075     High High
cufflinks 4.801       Low
cufflinks 9.857     High  
cufflinks 8.772     High  
cufflinks 12.248     High  
cufflinks 9.455     High  
cufflinks 9.922     High  
cufflinks 8.085     High  
cufflinks 10.986     High  
cufflinks 10.846     High  
cufflinks 10.73     High  
cufflinks 9.659     High  
cufflinks 8.211     High  

0 Strain