Gene : Glyma.12G197600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31062:SF11 - XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 9 Genomic Order:  1976
Name:  ? Glyma.12G197600 Secondary Identifier:  ? PAC:30547921
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G197600 0.5kb upstream 0.5kb upstream 3174 true Chr12: 35878606-35881779 Glycine max
Glyma.12G197600 0.5kb upstream 0.5kb upstream 500 false Chr12: 35878606-35879105 Glycine max
Glyma.12G197600 0.5kb downstream 0.5kb downstream 3174 true Chr12: 35879106-35882279 Glycine max
Glyma.12G197600 0.5kb downstream 0.5kb downstream 500 false Chr12: 35881780-35882279 Glycine max
Glyma.12G197600 1.0kb upstream 1.0kb upstream 3674 true Chr12: 35878106-35881779 Glycine max
Glyma.12G197600 1.0kb upstream 1.0kb upstream 1000 false Chr12: 35878106-35879105 Glycine max
Glyma.12G197600 1.0kb downstream 1.0kb downstream 3674 true Chr12: 35879106-35882779 Glycine max
Glyma.12G197600 1.0kb downstream 1.0kb downstream 1000 false Chr12: 35881780-35882779 Glycine max
Glyma.12G197600 2.0kb upstream 2.0kb upstream 4674 true Chr12: 35877106-35881779 Glycine max
Glyma.12G197600 2.0kb upstream 2.0kb upstream 2000 false Chr12: 35877106-35879105 Glycine max
Glyma.12G197600 2.0kb downstream 2.0kb downstream 4674 true Chr12: 35879106-35883779 Glycine max
Glyma.12G197600 2.0kb downstream 2.0kb downstream 2000 false Chr12: 35881780-35883779 Glycine max
Glyma.12G197600 5.0kb upstream 5.0kb upstream 7674 true Chr12: 35874106-35881779 Glycine max
Glyma.12G197600 5.0kb upstream 5.0kb upstream 5000 false Chr12: 35874106-35879105 Glycine max
Glyma.12G197600 5.0kb downstream 5.0kb downstream 7674 true Chr12: 35879106-35886779 Glycine max
Glyma.12G197600 5.0kb downstream 5.0kb downstream 5000 false Chr12: 35881780-35886779 Glycine max
Glyma.12G197600 10.0kb upstream 10.0kb upstream 12674 true Chr12: 35869106-35881779 Glycine max
Glyma.12G197600 10.0kb upstream 10.0kb upstream 10000 false Chr12: 35869106-35879105 Glycine max
Glyma.12G197600 10.0kb downstream 10.0kb downstream 12674 true Chr12: 35879106-35891779 Glycine max
Glyma.12G197600 10.0kb downstream 10.0kb downstream 10000 false Chr12: 35881780-35891779 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311223 5265 Fabidae View MSA
124074045 5270 Rosid View MSA
123744569 5271 Pentapetalae View MSA
122789262 5272 Eudicot View MSA
122045078 5273 Angiosperm View MSA
121350333 5274 Embryophyte View MSA
123381682 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.307612 0.0 1.17736   Low
cufflinks 25.368 0.0 67.687 High  
cufflinks 4.16799 0.0 12.8643    
cufflinks 17.8148 0.0 47.7352    
cufflinks 20.6403 0.0 55.1045 High  
cufflinks 10.0131 0.0 27.7012    
cufflinks 9.72473 0.0 26.949    
cufflinks 13.4045 0.0 36.3104    
cufflinks 20.5545 0.0 54.8824 High  
cufflinks 27.245     High High
cufflinks 0.498       Low
cufflinks 8.278     High  
cufflinks 8.169     High  
cufflinks 15.507     High  
cufflinks 2.2        
cufflinks 17.453     High  
cufflinks 1.781        
cufflinks 15.053     High  
cufflinks 12.072     High  
cufflinks 12.579     High  
cufflinks 0.353       Low
cufflinks 10.633     High  
cufflinks 21.596     High  
cufflinks 0.09       Low
cufflinks 9.942     High  
cufflinks 2.001        

0 Strain