Gene : Glyma.12G197700 G. max Wm82.a2.v1
Defline:  (1 of 8) PTHR31241:SF2 - DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2A-RELATED Genomic Order:  1977
Name:  ? Glyma.12G197700 Secondary Identifier:  ? PAC:30548094
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G197700 0.5kb upstream 0.5kb upstream 2423 true Chr12: 35885112-35887534 Glycine max
Glyma.12G197700 0.5kb upstream 0.5kb upstream 500 false Chr12: 35885112-35885611 Glycine max
Glyma.12G197700 0.5kb downstream 0.5kb downstream 2423 true Chr12: 35885612-35888034 Glycine max
Glyma.12G197700 0.5kb downstream 0.5kb downstream 500 false Chr12: 35887535-35888034 Glycine max
Glyma.12G197700 1.0kb upstream 1.0kb upstream 2923 true Chr12: 35884612-35887534 Glycine max
Glyma.12G197700 1.0kb upstream 1.0kb upstream 1000 false Chr12: 35884612-35885611 Glycine max
Glyma.12G197700 1.0kb downstream 1.0kb downstream 2923 true Chr12: 35885612-35888534 Glycine max
Glyma.12G197700 1.0kb downstream 1.0kb downstream 1000 false Chr12: 35887535-35888534 Glycine max
Glyma.12G197700 2.0kb upstream 2.0kb upstream 3923 true Chr12: 35883612-35887534 Glycine max
Glyma.12G197700 2.0kb upstream 2.0kb upstream 2000 false Chr12: 35883612-35885611 Glycine max
Glyma.12G197700 2.0kb downstream 2.0kb downstream 3923 true Chr12: 35885612-35889534 Glycine max
Glyma.12G197700 2.0kb downstream 2.0kb downstream 2000 false Chr12: 35887535-35889534 Glycine max
Glyma.12G197700 5.0kb upstream 5.0kb upstream 6923 true Chr12: 35880612-35887534 Glycine max
Glyma.12G197700 5.0kb upstream 5.0kb upstream 5000 false Chr12: 35880612-35885611 Glycine max
Glyma.12G197700 5.0kb downstream 5.0kb downstream 6923 true Chr12: 35885612-35892534 Glycine max
Glyma.12G197700 5.0kb downstream 5.0kb downstream 5000 false Chr12: 35887535-35892534 Glycine max
Glyma.12G197700 10.0kb upstream 10.0kb upstream 11923 true Chr12: 35875612-35887534 Glycine max
Glyma.12G197700 10.0kb upstream 10.0kb upstream 10000 false Chr12: 35875612-35885611 Glycine max
Glyma.12G197700 10.0kb downstream 10.0kb downstream 11923 true Chr12: 35885612-35897534 Glycine max
Glyma.12G197700 10.0kb downstream 10.0kb downstream 10000 false Chr12: 35887535-35897534 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310464 5265 Fabidae View MSA
124068554 5270 Rosid View MSA
123752289 5271 Pentapetalae View MSA
122797550 5272 Eudicot View MSA
122049756 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121349420 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.867 0.0 35.57    
cufflinks 25.5069 0.0 68.1457 High High
cufflinks 16.7004 0.0 45.2726    
cufflinks 20.0245 0.0 53.849 High  
cufflinks 17.019 0.0 46.1223    
cufflinks 11.5585 0.0 32.2466   Low
cufflinks 33.9128 0.0 90.5453 High High
cufflinks 12.5971 0.0 34.8794    
cufflinks 16.198 0.0 44.0246    
cufflinks 5.51        
cufflinks 4.026       Low
cufflinks 9.193     High  
cufflinks 4.794        
cufflinks 6.634        
cufflinks 4.499        
cufflinks 12.72     High High
cufflinks 4.537        
cufflinks 8.917     High  
cufflinks 12.516     High High
cufflinks 12.609     High High
cufflinks 4.122       Low
cufflinks 12.846     High High
cufflinks 14.776     High High
cufflinks 4.972        
cufflinks 12.341     High High
cufflinks 4.441       Low

0 Strain