Gene : Glyma.12G199800 G. max Wm82.a2.v1
Defline:  (1 of 152) PF02458 - Transferase family (Transferase) Genomic Order:  1998
Name:  ? Glyma.12G199800 Secondary Identifier:  ? PAC:30547136
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G199800 0.5kb upstream 0.5kb upstream 2619 true Chr12: 36119518-36122136 Glycine max
Glyma.12G199800 0.5kb upstream 0.5kb upstream 500 false Chr12: 36121637-36122136 Glycine max
Glyma.12G199800 0.5kb downstream 0.5kb downstream 2619 true Chr12: 36119018-36121636 Glycine max
Glyma.12G199800 0.5kb downstream 0.5kb downstream 500 false Chr12: 36119018-36119517 Glycine max
Glyma.12G199800 1.0kb upstream 1.0kb upstream 3119 true Chr12: 36119518-36122636 Glycine max
Glyma.12G199800 1.0kb upstream 1.0kb upstream 1000 false Chr12: 36121637-36122636 Glycine max
Glyma.12G199800 1.0kb downstream 1.0kb downstream 3119 true Chr12: 36118518-36121636 Glycine max
Glyma.12G199800 1.0kb downstream 1.0kb downstream 1000 false Chr12: 36118518-36119517 Glycine max
Glyma.12G199800 2.0kb upstream 2.0kb upstream 4119 true Chr12: 36119518-36123636 Glycine max
Glyma.12G199800 2.0kb upstream 2.0kb upstream 2000 false Chr12: 36121637-36123636 Glycine max
Glyma.12G199800 2.0kb downstream 2.0kb downstream 4119 true Chr12: 36117518-36121636 Glycine max
Glyma.12G199800 2.0kb downstream 2.0kb downstream 2000 false Chr12: 36117518-36119517 Glycine max
Glyma.12G199800 5.0kb upstream 5.0kb upstream 7119 true Chr12: 36119518-36126636 Glycine max
Glyma.12G199800 5.0kb upstream 5.0kb upstream 5000 false Chr12: 36121637-36126636 Glycine max
Glyma.12G199800 5.0kb downstream 5.0kb downstream 7119 true Chr12: 36114518-36121636 Glycine max
Glyma.12G199800 5.0kb downstream 5.0kb downstream 5000 false Chr12: 36114518-36119517 Glycine max
Glyma.12G199800 10.0kb upstream 10.0kb upstream 12119 true Chr12: 36119518-36131636 Glycine max
Glyma.12G199800 10.0kb upstream 10.0kb upstream 10000 false Chr12: 36121637-36131636 Glycine max
Glyma.12G199800 10.0kb downstream 10.0kb downstream 12119 true Chr12: 36109518-36121636 Glycine max
Glyma.12G199800 10.0kb downstream 10.0kb downstream 10000 false Chr12: 36109518-36119517 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313056 5265 Fabidae View MSA
124073771 5270 Rosid View MSA
123753544 5271 Pentapetalae View MSA
122797119 5272 Eudicot View MSA
122051643 5273 Angiosperm View MSA
121350983 5274 Embryophyte View MSA
123428782 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.34549 0.0 4.60545   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.224592 0.0 0.857187    
cufflinks 0.0182545 0.0 0.0790706 Low Low
cufflinks 0.107126 0.0 0.422057 Low  
cufflinks 1.29111 0.0 4.43308   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0553977 0.0 0.223478 Low  
cufflinks 0.156946 0.0 0.608855 Low  
cufflinks 0.172        
cufflinks 0.093        
cufflinks 0.49       High
cufflinks 0.124        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.009     Low Low
cufflinks 0.2        
cufflinks 0.033     Low Low
cufflinks 0.177        
cufflinks 0.122        
cufflinks 0.052     Low  
cufflinks 0.033     Low Low
cufflinks 0.287       High
cufflinks 0.086     Low  
cufflinks 0.265       High
cufflinks 0.04     Low  
cufflinks 0.086        

0 Strain