Gene : Glyma.12G201700 G. max Wm82.a2.v1
Defline:  (1 of 4) 2.1.2.5 - Glutamate formimidoyltransferase / Glutamate formyltransferase Genomic Order:  2017
Name:  ? Glyma.12G201700 Secondary Identifier:  ? PAC:30548073
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-3841 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G201700 0.5kb upstream 0.5kb upstream 3198 true Chr12: 36218998-36222195 Glycine max
Glyma.12G201700 0.5kb upstream 0.5kb upstream 500 false Chr12: 36218998-36219497 Glycine max
Glyma.12G201700 0.5kb downstream 0.5kb downstream 3198 true Chr12: 36219498-36222695 Glycine max
Glyma.12G201700 0.5kb downstream 0.5kb downstream 500 false Chr12: 36222196-36222695 Glycine max
Glyma.12G201700 1.0kb upstream 1.0kb upstream 3698 true Chr12: 36218498-36222195 Glycine max
Glyma.12G201700 1.0kb upstream 1.0kb upstream 1000 false Chr12: 36218498-36219497 Glycine max
Glyma.12G201700 1.0kb downstream 1.0kb downstream 3698 true Chr12: 36219498-36223195 Glycine max
Glyma.12G201700 1.0kb downstream 1.0kb downstream 1000 false Chr12: 36222196-36223195 Glycine max
Glyma.12G201700 2.0kb upstream 2.0kb upstream 4698 true Chr12: 36217498-36222195 Glycine max
Glyma.12G201700 2.0kb upstream 2.0kb upstream 2000 false Chr12: 36217498-36219497 Glycine max
Glyma.12G201700 2.0kb downstream 2.0kb downstream 4698 true Chr12: 36219498-36224195 Glycine max
Glyma.12G201700 2.0kb downstream 2.0kb downstream 2000 false Chr12: 36222196-36224195 Glycine max
Glyma.12G201700 5.0kb upstream 5.0kb upstream 7698 true Chr12: 36214498-36222195 Glycine max
Glyma.12G201700 5.0kb upstream 5.0kb upstream 5000 false Chr12: 36214498-36219497 Glycine max
Glyma.12G201700 5.0kb downstream 5.0kb downstream 7698 true Chr12: 36219498-36227195 Glycine max
Glyma.12G201700 5.0kb downstream 5.0kb downstream 5000 false Chr12: 36222196-36227195 Glycine max
Glyma.12G201700 10.0kb upstream 10.0kb upstream 12698 true Chr12: 36209498-36222195 Glycine max
Glyma.12G201700 10.0kb upstream 10.0kb upstream 10000 false Chr12: 36209498-36219497 Glycine max
Glyma.12G201700 10.0kb downstream 10.0kb downstream 12698 true Chr12: 36219498-36232195 Glycine max
Glyma.12G201700 10.0kb downstream 10.0kb downstream 10000 false Chr12: 36222196-36232195 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310861 5265 Fabidae View MSA
124070892 5270 Rosid View MSA
123745948 5271 Pentapetalae View MSA
122795317 5272 Eudicot View MSA
122048049 5273 Angiosperm View MSA
121344000 5274 Embryophyte View MSA
123424939 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.37965 0.0 10.8494   High
cufflinks 0.545321 0.0 2.04212    
cufflinks 0.182973 0.0 0.716556 Low  
cufflinks 0.224036 0.0 0.871442    
cufflinks 0.0913531 0.0 0.367753 Low  
cufflinks 0.388402 0.0 1.4761    
cufflinks 0.0308586 0.0 0.132751 Low Low
cufflinks 0.275181 0.0 1.06136    
cufflinks 0.263714 0.0 1.01931    
cufflinks 0.192        
cufflinks 0.041     Low  
cufflinks 0.133        
cufflinks 0.157        
cufflinks 0.158        
cufflinks 0.015     Low Low
cufflinks 0.924       High
cufflinks 0.019     Low Low
cufflinks 0.132        
cufflinks 0.126        
cufflinks 1.027       High
cufflinks 0.043     Low  
cufflinks 0.957       High
cufflinks 0.78       High
cufflinks 0.048     Low  
cufflinks 1.0       High
cufflinks 0.053     Low  

0 Strain