Gene : Glyma.12G201900 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR11205:SF24 - 40S RIBOSOMAL PROTEIN S5-1-RELATED Genomic Order:  2019
Name:  ? Glyma.12G201900 Secondary Identifier:  ? PAC:30548342
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G201900 0.5kb upstream 0.5kb upstream 3640 true Chr12: 36231547-36235186 Glycine max
Glyma.12G201900 0.5kb upstream 0.5kb upstream 500 false Chr12: 36234687-36235186 Glycine max
Glyma.12G201900 0.5kb downstream 0.5kb downstream 3640 true Chr12: 36231047-36234686 Glycine max
Glyma.12G201900 0.5kb downstream 0.5kb downstream 500 false Chr12: 36231047-36231546 Glycine max
Glyma.12G201900 1.0kb upstream 1.0kb upstream 4140 true Chr12: 36231547-36235686 Glycine max
Glyma.12G201900 1.0kb upstream 1.0kb upstream 1000 false Chr12: 36234687-36235686 Glycine max
Glyma.12G201900 1.0kb downstream 1.0kb downstream 4140 true Chr12: 36230547-36234686 Glycine max
Glyma.12G201900 1.0kb downstream 1.0kb downstream 1000 false Chr12: 36230547-36231546 Glycine max
Glyma.12G201900 2.0kb upstream 2.0kb upstream 5140 true Chr12: 36231547-36236686 Glycine max
Glyma.12G201900 2.0kb upstream 2.0kb upstream 2000 false Chr12: 36234687-36236686 Glycine max
Glyma.12G201900 2.0kb downstream 2.0kb downstream 5140 true Chr12: 36229547-36234686 Glycine max
Glyma.12G201900 2.0kb downstream 2.0kb downstream 2000 false Chr12: 36229547-36231546 Glycine max
Glyma.12G201900 5.0kb upstream 5.0kb upstream 8140 true Chr12: 36231547-36239686 Glycine max
Glyma.12G201900 5.0kb upstream 5.0kb upstream 5000 false Chr12: 36234687-36239686 Glycine max
Glyma.12G201900 5.0kb downstream 5.0kb downstream 8140 true Chr12: 36226547-36234686 Glycine max
Glyma.12G201900 5.0kb downstream 5.0kb downstream 5000 false Chr12: 36226547-36231546 Glycine max
Glyma.12G201900 10.0kb upstream 10.0kb upstream 13140 true Chr12: 36231547-36244686 Glycine max
Glyma.12G201900 10.0kb upstream 10.0kb upstream 10000 false Chr12: 36234687-36244686 Glycine max
Glyma.12G201900 10.0kb downstream 10.0kb downstream 13140 true Chr12: 36221547-36234686 Glycine max
Glyma.12G201900 10.0kb downstream 10.0kb downstream 10000 false Chr12: 36221547-36231546 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311840 5265 Fabidae View MSA
124064641 5270 Rosid View MSA
123749742 5271 Pentapetalae View MSA
122785829 5272 Eudicot View MSA
122048966 5273 Angiosperm View MSA
121345669 5274 Embryophyte View MSA
123423957 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 30.9211 0.0 83.3813 High  
cufflinks 38.8898 0.0 106.451 High  
cufflinks 15.6857 0.0 41.9312   Low
cufflinks 27.0834 0.0 72.6895 High  
cufflinks 64.5391 0.0 186.149 High High
cufflinks 39.3341 0.0 107.798 High  
cufflinks 58.9891 0.0 168.037 High High
cufflinks 38.3406 0.0 104.839 High  
cufflinks 46.2798 0.0 128.631 High  
cufflinks 18.637     High  
cufflinks 5.417       Low
cufflinks 13.226     High  
cufflinks 38.213     High High
cufflinks 57.581     High High
cufflinks 6.918     High Low
cufflinks 17.799     High  
cufflinks 12.532     High  
cufflinks 13.931     High  
cufflinks 21.228     High  
cufflinks 15.352     High  
cufflinks 11.11     High  
cufflinks 14.905     High  
cufflinks 19.889     High  
cufflinks 6.061       Low
cufflinks 17.973     High  
cufflinks 13.875     High  

0 Strain