Gene : Glyma.12G202600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31343:SF3 - GB Genomic Order:  2026
Name:  ? Glyma.12G202600 Secondary Identifier:  ? PAC:30547099
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G202600 0.5kb upstream 0.5kb upstream 3702 true Chr12: 36318726-36322427 Glycine max
Glyma.12G202600 0.5kb upstream 0.5kb upstream 500 false Chr12: 36318726-36319225 Glycine max
Glyma.12G202600 0.5kb downstream 0.5kb downstream 3702 true Chr12: 36319226-36322927 Glycine max
Glyma.12G202600 0.5kb downstream 0.5kb downstream 500 false Chr12: 36322428-36322927 Glycine max
Glyma.12G202600 1.0kb upstream 1.0kb upstream 4202 true Chr12: 36318226-36322427 Glycine max
Glyma.12G202600 1.0kb upstream 1.0kb upstream 1000 false Chr12: 36318226-36319225 Glycine max
Glyma.12G202600 1.0kb downstream 1.0kb downstream 4202 true Chr12: 36319226-36323427 Glycine max
Glyma.12G202600 1.0kb downstream 1.0kb downstream 1000 false Chr12: 36322428-36323427 Glycine max
Glyma.12G202600 2.0kb upstream 2.0kb upstream 5202 true Chr12: 36317226-36322427 Glycine max
Glyma.12G202600 2.0kb upstream 2.0kb upstream 2000 false Chr12: 36317226-36319225 Glycine max
Glyma.12G202600 2.0kb downstream 2.0kb downstream 5202 true Chr12: 36319226-36324427 Glycine max
Glyma.12G202600 2.0kb downstream 2.0kb downstream 2000 false Chr12: 36322428-36324427 Glycine max
Glyma.12G202600 5.0kb upstream 5.0kb upstream 8202 true Chr12: 36314226-36322427 Glycine max
Glyma.12G202600 5.0kb upstream 5.0kb upstream 5000 false Chr12: 36314226-36319225 Glycine max
Glyma.12G202600 5.0kb downstream 5.0kb downstream 8202 true Chr12: 36319226-36327427 Glycine max
Glyma.12G202600 5.0kb downstream 5.0kb downstream 5000 false Chr12: 36322428-36327427 Glycine max
Glyma.12G202600 10.0kb upstream 10.0kb upstream 13202 true Chr12: 36309226-36322427 Glycine max
Glyma.12G202600 10.0kb upstream 10.0kb upstream 10000 false Chr12: 36309226-36319225 Glycine max
Glyma.12G202600 10.0kb downstream 10.0kb downstream 13202 true Chr12: 36319226-36332427 Glycine max
Glyma.12G202600 10.0kb downstream 10.0kb downstream 10000 false Chr12: 36322428-36332427 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314759 5265 Fabidae View MSA
124067567 5270 Rosid View MSA
123743761 5271 Pentapetalae View MSA
122791281 5272 Eudicot View MSA
122049858 5273 Angiosperm View MSA
121311619 5274 Embryophyte View MSA
123425809 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.01794 0.0 9.68014   Low
cufflinks 3.88753 0.0 12.0378    
cufflinks 21.6408 0.0 57.7352 High High
cufflinks 3.90044 0.0 12.0392    
cufflinks 5.08703 0.0 15.1609    
cufflinks 7.79657 0.0 22.0265    
cufflinks 6.7857 0.0 19.4491    
cufflinks 5.17066 0.0 15.3419    
cufflinks 8.65336 0.0 24.1731    
cufflinks 1.594        
cufflinks 9.9     High High
cufflinks 4.253        
cufflinks 0.916       Low
cufflinks 0.648       Low
cufflinks 11.32     High High
cufflinks 1.866        
cufflinks 3.266        
cufflinks 2.707        
cufflinks 3.205        
cufflinks 1.735        
cufflinks 8.122     High High
cufflinks 1.859        
cufflinks 2.064        
cufflinks 11.03     High High
cufflinks 1.823        
cufflinks 11.955     High High

0 Strain