Gene : Glyma.12G203500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10639//PTHR10639:SF8 - CLATHRIN LIGHT CHAIN Genomic Order:  2035
Name:  ? Glyma.12G203500 Secondary Identifier:  ? PAC:30545648
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G203500 0.5kb upstream 0.5kb upstream 2747 true Chr12: 36385724-36388470 Glycine max
Glyma.12G203500 0.5kb upstream 0.5kb upstream 500 false Chr12: 36385724-36386223 Glycine max
Glyma.12G203500 0.5kb downstream 0.5kb downstream 2747 true Chr12: 36386224-36388970 Glycine max
Glyma.12G203500 0.5kb downstream 0.5kb downstream 500 false Chr12: 36388471-36388970 Glycine max
Glyma.12G203500 1.0kb upstream 1.0kb upstream 3247 true Chr12: 36385224-36388470 Glycine max
Glyma.12G203500 1.0kb upstream 1.0kb upstream 1000 false Chr12: 36385224-36386223 Glycine max
Glyma.12G203500 1.0kb downstream 1.0kb downstream 3247 true Chr12: 36386224-36389470 Glycine max
Glyma.12G203500 1.0kb downstream 1.0kb downstream 1000 false Chr12: 36388471-36389470 Glycine max
Glyma.12G203500 2.0kb upstream 2.0kb upstream 4247 true Chr12: 36384224-36388470 Glycine max
Glyma.12G203500 2.0kb upstream 2.0kb upstream 2000 false Chr12: 36384224-36386223 Glycine max
Glyma.12G203500 2.0kb downstream 2.0kb downstream 4247 true Chr12: 36386224-36390470 Glycine max
Glyma.12G203500 2.0kb downstream 2.0kb downstream 2000 false Chr12: 36388471-36390470 Glycine max
Glyma.12G203500 5.0kb upstream 5.0kb upstream 7247 true Chr12: 36381224-36388470 Glycine max
Glyma.12G203500 5.0kb upstream 5.0kb upstream 5000 false Chr12: 36381224-36386223 Glycine max
Glyma.12G203500 5.0kb downstream 5.0kb downstream 7247 true Chr12: 36386224-36393470 Glycine max
Glyma.12G203500 5.0kb downstream 5.0kb downstream 5000 false Chr12: 36388471-36393470 Glycine max
Glyma.12G203500 10.0kb upstream 10.0kb upstream 12247 true Chr12: 36376224-36388470 Glycine max
Glyma.12G203500 10.0kb upstream 10.0kb upstream 10000 false Chr12: 36376224-36386223 Glycine max
Glyma.12G203500 10.0kb downstream 10.0kb downstream 12247 true Chr12: 36386224-36398470 Glycine max
Glyma.12G203500 10.0kb downstream 10.0kb downstream 10000 false Chr12: 36388471-36398470 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310127 5265 Fabidae View MSA
124061601 5270 Rosid View MSA
123752626 5271 Pentapetalae View MSA
122796141 5272 Eudicot View MSA
122042029 5273 Angiosperm View MSA
121347289 5274 Embryophyte View MSA
123426291 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0786564 0.0 0.317593 Low  
cufflinks 0.596037 0.0 2.21481   High
cufflinks 0.0172087 0.0 0.0772196 Low  
cufflinks 0.013785 0.0 0.0633306 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0428061 0.0 0.178741 Low  
cufflinks 0.0450691 0.0 0.187254 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.034     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.259       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.008     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.018     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.177       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.054     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.025     Low  
cufflinks 0.021     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.036     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain