Gene : Glyma.12G191100 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR12416:SF2 - RRNA-PROCESSING PROTEIN FCF1 HOMOLOG Genomic Order:  1911
Name:  ? Glyma.12G191100 Secondary Identifier:  ? PAC:30545813
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G191100 0.5kb upstream 0.5kb upstream 4821 true Chr12: 35276792-35281612 Glycine max
Glyma.12G191100 0.5kb upstream 0.5kb upstream 500 false Chr12: 35276792-35277291 Glycine max
Glyma.12G191100 0.5kb downstream 0.5kb downstream 4821 true Chr12: 35277292-35282112 Glycine max
Glyma.12G191100 0.5kb downstream 0.5kb downstream 500 false Chr12: 35281613-35282112 Glycine max
Glyma.12G191100 1.0kb upstream 1.0kb upstream 5321 true Chr12: 35276292-35281612 Glycine max
Glyma.12G191100 1.0kb upstream 1.0kb upstream 1000 false Chr12: 35276292-35277291 Glycine max
Glyma.12G191100 1.0kb downstream 1.0kb downstream 5321 true Chr12: 35277292-35282612 Glycine max
Glyma.12G191100 1.0kb downstream 1.0kb downstream 1000 false Chr12: 35281613-35282612 Glycine max
Glyma.12G191100 2.0kb upstream 2.0kb upstream 6321 true Chr12: 35275292-35281612 Glycine max
Glyma.12G191100 2.0kb upstream 2.0kb upstream 2000 false Chr12: 35275292-35277291 Glycine max
Glyma.12G191100 2.0kb downstream 2.0kb downstream 6321 true Chr12: 35277292-35283612 Glycine max
Glyma.12G191100 2.0kb downstream 2.0kb downstream 2000 false Chr12: 35281613-35283612 Glycine max
Glyma.12G191100 5.0kb upstream 5.0kb upstream 9321 true Chr12: 35272292-35281612 Glycine max
Glyma.12G191100 5.0kb upstream 5.0kb upstream 5000 false Chr12: 35272292-35277291 Glycine max
Glyma.12G191100 5.0kb downstream 5.0kb downstream 9321 true Chr12: 35277292-35286612 Glycine max
Glyma.12G191100 5.0kb downstream 5.0kb downstream 5000 false Chr12: 35281613-35286612 Glycine max
Glyma.12G191100 10.0kb upstream 10.0kb upstream 14321 true Chr12: 35267292-35281612 Glycine max
Glyma.12G191100 10.0kb upstream 10.0kb upstream 10000 false Chr12: 35267292-35277291 Glycine max
Glyma.12G191100 10.0kb downstream 10.0kb downstream 14321 true Chr12: 35277292-35291612 Glycine max
Glyma.12G191100 10.0kb downstream 10.0kb downstream 10000 false Chr12: 35281613-35291612 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300210 5265 Fabidae View MSA
124074295 5270 Rosid View MSA
123738427 5271 Pentapetalae View MSA
122793341 5272 Eudicot View MSA
122042240 5273 Angiosperm View MSA
121350234 5274 Embryophyte View MSA
123426184 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.5278 0.0 34.4669    
cufflinks 10.1737 0.0 28.4968    
cufflinks 6.26655 0.0 18.5742   Low
cufflinks 10.3022 0.0 28.7696    
cufflinks 14.6015 0.0 39.7253    
cufflinks 11.9127 0.0 32.8857    
cufflinks 18.1321 0.0 48.8213   High
cufflinks 8.63413 0.0 24.5871    
cufflinks 13.0984 0.0 35.8955    
cufflinks 1.827       Low
cufflinks 2.272        
cufflinks 2.288        
cufflinks 4.579       High
cufflinks 5.979       High
cufflinks 2.75        
cufflinks 2.237        
cufflinks 1.417       Low
cufflinks 2.187        
cufflinks 2.854        
cufflinks 2.647        
cufflinks 2.543        
cufflinks 2.334        
cufflinks 2.43        
cufflinks 2.454        
cufflinks 2.448        
cufflinks 2.253        

0 Strain