Gene : Glyma.12G192600 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR12701:SF18 - 4D656-RELATED Genomic Order:  1926
Name:  ? Glyma.12G192600 Secondary Identifier:  ? PAC:30548961
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G192600 0.5kb upstream 0.5kb upstream 2632 true Chr12: 35416668-35419299 Glycine max
Glyma.12G192600 0.5kb upstream 0.5kb upstream 500 false Chr12: 35418800-35419299 Glycine max
Glyma.12G192600 0.5kb downstream 0.5kb downstream 2632 true Chr12: 35416168-35418799 Glycine max
Glyma.12G192600 0.5kb downstream 0.5kb downstream 500 false Chr12: 35416168-35416667 Glycine max
Glyma.12G192600 1.0kb upstream 1.0kb upstream 3132 true Chr12: 35416668-35419799 Glycine max
Glyma.12G192600 1.0kb upstream 1.0kb upstream 1000 false Chr12: 35418800-35419799 Glycine max
Glyma.12G192600 1.0kb downstream 1.0kb downstream 3132 true Chr12: 35415668-35418799 Glycine max
Glyma.12G192600 1.0kb downstream 1.0kb downstream 1000 false Chr12: 35415668-35416667 Glycine max
Glyma.12G192600 2.0kb upstream 2.0kb upstream 4132 true Chr12: 35416668-35420799 Glycine max
Glyma.12G192600 2.0kb upstream 2.0kb upstream 2000 false Chr12: 35418800-35420799 Glycine max
Glyma.12G192600 2.0kb downstream 2.0kb downstream 4132 true Chr12: 35414668-35418799 Glycine max
Glyma.12G192600 2.0kb downstream 2.0kb downstream 2000 false Chr12: 35414668-35416667 Glycine max
Glyma.12G192600 5.0kb upstream 5.0kb upstream 7132 true Chr12: 35416668-35423799 Glycine max
Glyma.12G192600 5.0kb upstream 5.0kb upstream 5000 false Chr12: 35418800-35423799 Glycine max
Glyma.12G192600 5.0kb downstream 5.0kb downstream 7132 true Chr12: 35411668-35418799 Glycine max
Glyma.12G192600 5.0kb downstream 5.0kb downstream 5000 false Chr12: 35411668-35416667 Glycine max
Glyma.12G192600 10.0kb upstream 10.0kb upstream 12132 true Chr12: 35416668-35428799 Glycine max
Glyma.12G192600 10.0kb upstream 10.0kb upstream 10000 false Chr12: 35418800-35428799 Glycine max
Glyma.12G192600 10.0kb downstream 10.0kb downstream 12132 true Chr12: 35406668-35418799 Glycine max
Glyma.12G192600 10.0kb downstream 10.0kb downstream 10000 false Chr12: 35406668-35416667 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311093 5265 Fabidae View MSA
124069525 5270 Rosid View MSA
123738929 5271 Pentapetalae View MSA
122789620 5272 Eudicot View MSA
122043200 5273 Angiosperm View MSA
121347866 5274 Embryophyte View MSA
123426905 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.378624 0.0 1.44285   Low
cufflinks 10.2964 0.0 28.7491   High
cufflinks 4.51956 0.0 14.0464    
cufflinks 2.51524 0.0 8.44586    
cufflinks 2.14142 0.0 7.30112    
cufflinks 7.95264 0.0 22.8183   High
cufflinks 2.59949 0.0 8.68793    
cufflinks 2.98534 0.0 9.79333    
cufflinks 0.554502 0.0 2.07683   Low
cufflinks 16.495     High  
cufflinks 9.346     High  
cufflinks 8.586     High  
cufflinks 1.19       Low
cufflinks 1.427       Low
cufflinks 0.452       Low
cufflinks 7.794     High  
cufflinks 124.303     High High
cufflinks 5.608        
cufflinks 5.514        
cufflinks 3.97        
cufflinks 10.026     High  
cufflinks 4.545        
cufflinks 3.81        
cufflinks 7.015     High  
cufflinks 3.553        
cufflinks 16.348     High  

0 Strain