Gene : Glyma.12G193600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11214:SF5 - BETA-1,3-GALACTOSYLTRANSFERASE 2-RELATED Genomic Order:  1936
Name:  ? Glyma.12G193600 Secondary Identifier:  ? PAC:30545663
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G193600 0.5kb upstream 0.5kb upstream 5186 true Chr12: 35512904-35518089 Glycine max
Glyma.12G193600 0.5kb upstream 0.5kb upstream 500 false Chr12: 35517590-35518089 Glycine max
Glyma.12G193600 0.5kb downstream 0.5kb downstream 5186 true Chr12: 35512404-35517589 Glycine max
Glyma.12G193600 0.5kb downstream 0.5kb downstream 500 false Chr12: 35512404-35512903 Glycine max
Glyma.12G193600 1.0kb upstream 1.0kb upstream 5686 true Chr12: 35512904-35518589 Glycine max
Glyma.12G193600 1.0kb upstream 1.0kb upstream 1000 false Chr12: 35517590-35518589 Glycine max
Glyma.12G193600 1.0kb downstream 1.0kb downstream 5686 true Chr12: 35511904-35517589 Glycine max
Glyma.12G193600 1.0kb downstream 1.0kb downstream 1000 false Chr12: 35511904-35512903 Glycine max
Glyma.12G193600 2.0kb upstream 2.0kb upstream 6686 true Chr12: 35512904-35519589 Glycine max
Glyma.12G193600 2.0kb upstream 2.0kb upstream 2000 false Chr12: 35517590-35519589 Glycine max
Glyma.12G193600 2.0kb downstream 2.0kb downstream 6686 true Chr12: 35510904-35517589 Glycine max
Glyma.12G193600 2.0kb downstream 2.0kb downstream 2000 false Chr12: 35510904-35512903 Glycine max
Glyma.12G193600 5.0kb upstream 5.0kb upstream 9686 true Chr12: 35512904-35522589 Glycine max
Glyma.12G193600 5.0kb upstream 5.0kb upstream 5000 false Chr12: 35517590-35522589 Glycine max
Glyma.12G193600 5.0kb downstream 5.0kb downstream 9686 true Chr12: 35507904-35517589 Glycine max
Glyma.12G193600 5.0kb downstream 5.0kb downstream 5000 false Chr12: 35507904-35512903 Glycine max
Glyma.12G193600 10.0kb upstream 10.0kb upstream 14686 true Chr12: 35512904-35527589 Glycine max
Glyma.12G193600 10.0kb upstream 10.0kb upstream 10000 false Chr12: 35517590-35527589 Glycine max
Glyma.12G193600 10.0kb downstream 10.0kb downstream 14686 true Chr12: 35502904-35517589 Glycine max
Glyma.12G193600 10.0kb downstream 10.0kb downstream 10000 false Chr12: 35502904-35512903 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309134 5265 Fabidae View MSA
124072370 5270 Rosid View MSA
123747291 5271 Pentapetalae View MSA
122789444 5272 Eudicot View MSA
122042482 5273 Angiosperm View MSA
121348547 5274 Embryophyte View MSA
123427932 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.31169 0.0 27.6966    
cufflinks 2.7462 0.0 13.3735    
cufflinks 3.82933 0.0 15.6606    
cufflinks 2.23236 0.0 11.926   Low
cufflinks 4.5694 0.0 22.2213    
cufflinks 7.36062 0.0 26.4972   High
cufflinks 8.73848 0.0 40.8852   High
cufflinks 2.54914 0.0 13.5209    
cufflinks 1.94645 0.0 8.56817   Low
cufflinks 1.435        
cufflinks 0.072       Low
cufflinks 1.105        
cufflinks 1.141        
cufflinks 1.042        
cufflinks 0.013     Low Low
cufflinks 1.865        
cufflinks 0.157        
cufflinks 3.042       High
cufflinks 0.556        
cufflinks 1.028        
cufflinks 0.082       Low
cufflinks 1.676        
cufflinks 1.572        
cufflinks 0.169        
cufflinks 1.209        
cufflinks 0.131        

0 Strain