Gene : Glyma.12G193900 G. max Wm82.a2.v1
Genomic Order:  1939 Name:  ? Glyma.12G193900
Secondary Identifier:  ? PAC:30548591
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G193900 0.5kb upstream 0.5kb upstream 884 true Chr12: 35561363-35562246 Glycine max
Glyma.12G193900 0.5kb upstream 0.5kb upstream 500 false Chr12: 35561747-35562246 Glycine max
Glyma.12G193900 0.5kb downstream 0.5kb downstream 884 true Chr12: 35560863-35561746 Glycine max
Glyma.12G193900 0.5kb downstream 0.5kb downstream 500 false Chr12: 35560863-35561362 Glycine max
Glyma.12G193900 1.0kb upstream 1.0kb upstream 1384 true Chr12: 35561363-35562746 Glycine max
Glyma.12G193900 1.0kb upstream 1.0kb upstream 1000 false Chr12: 35561747-35562746 Glycine max
Glyma.12G193900 1.0kb downstream 1.0kb downstream 1384 true Chr12: 35560363-35561746 Glycine max
Glyma.12G193900 1.0kb downstream 1.0kb downstream 1000 false Chr12: 35560363-35561362 Glycine max
Glyma.12G193900 2.0kb upstream 2.0kb upstream 2384 true Chr12: 35561363-35563746 Glycine max
Glyma.12G193900 2.0kb upstream 2.0kb upstream 2000 false Chr12: 35561747-35563746 Glycine max
Glyma.12G193900 2.0kb downstream 2.0kb downstream 2384 true Chr12: 35559363-35561746 Glycine max
Glyma.12G193900 2.0kb downstream 2.0kb downstream 2000 false Chr12: 35559363-35561362 Glycine max
Glyma.12G193900 5.0kb upstream 5.0kb upstream 5384 true Chr12: 35561363-35566746 Glycine max
Glyma.12G193900 5.0kb upstream 5.0kb upstream 5000 false Chr12: 35561747-35566746 Glycine max
Glyma.12G193900 5.0kb downstream 5.0kb downstream 5384 true Chr12: 35556363-35561746 Glycine max
Glyma.12G193900 5.0kb downstream 5.0kb downstream 5000 false Chr12: 35556363-35561362 Glycine max
Glyma.12G193900 10.0kb upstream 10.0kb upstream 10384 true Chr12: 35561363-35571746 Glycine max
Glyma.12G193900 10.0kb upstream 10.0kb upstream 10000 false Chr12: 35561747-35571746 Glycine max
Glyma.12G193900 10.0kb downstream 10.0kb downstream 10384 true Chr12: 35551363-35561746 Glycine max
Glyma.12G193900 10.0kb downstream 10.0kb downstream 10000 false Chr12: 35551363-35561362 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314647 5265 Fabidae View MSA
124050550 5270 Rosid View MSA
123744697 5271 Pentapetalae View MSA
122796556 5272 Eudicot View MSA
122051033 5273 Angiosperm View MSA
121312256 5274 Embryophyte View MSA
123349446 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0505027 0.0 0.242818 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.718297 0.0 2.85273   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.187536 0.0 0.799254 Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.121        
cufflinks 0.362       High
cufflinks 0.102        
cufflinks 0.054     Low  
cufflinks 0.602       High
cufflinks 0.039     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.051     Low  
cufflinks 0.055     Low  
cufflinks 0.044     Low  
cufflinks 0.041     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.144        

0 Strain