Gene : Glyma.12G194100 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR18966:SF241 - GLUTAMATE RECEPTOR 3.6-RELATED Genomic Order:  1941
Name:  ? Glyma.12G194100 Secondary Identifier:  ? PAC:30546292
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G194100 0.5kb upstream 0.5kb upstream 6420 true Chr12: 35577462-35583881 Glycine max
Glyma.12G194100 0.5kb upstream 0.5kb upstream 500 false Chr12: 35577462-35577961 Glycine max
Glyma.12G194100 0.5kb downstream 0.5kb downstream 6420 true Chr12: 35577962-35584381 Glycine max
Glyma.12G194100 0.5kb downstream 0.5kb downstream 500 false Chr12: 35583882-35584381 Glycine max
Glyma.12G194100 1.0kb upstream 1.0kb upstream 6920 true Chr12: 35576962-35583881 Glycine max
Glyma.12G194100 1.0kb upstream 1.0kb upstream 1000 false Chr12: 35576962-35577961 Glycine max
Glyma.12G194100 1.0kb downstream 1.0kb downstream 6920 true Chr12: 35577962-35584881 Glycine max
Glyma.12G194100 1.0kb downstream 1.0kb downstream 1000 false Chr12: 35583882-35584881 Glycine max
Glyma.12G194100 2.0kb upstream 2.0kb upstream 7920 true Chr12: 35575962-35583881 Glycine max
Glyma.12G194100 2.0kb upstream 2.0kb upstream 2000 false Chr12: 35575962-35577961 Glycine max
Glyma.12G194100 2.0kb downstream 2.0kb downstream 7920 true Chr12: 35577962-35585881 Glycine max
Glyma.12G194100 2.0kb downstream 2.0kb downstream 2000 false Chr12: 35583882-35585881 Glycine max
Glyma.12G194100 5.0kb upstream 5.0kb upstream 10920 true Chr12: 35572962-35583881 Glycine max
Glyma.12G194100 5.0kb upstream 5.0kb upstream 5000 false Chr12: 35572962-35577961 Glycine max
Glyma.12G194100 5.0kb downstream 5.0kb downstream 10920 true Chr12: 35577962-35588881 Glycine max
Glyma.12G194100 5.0kb downstream 5.0kb downstream 5000 false Chr12: 35583882-35588881 Glycine max
Glyma.12G194100 10.0kb upstream 10.0kb upstream 15920 true Chr12: 35567962-35583881 Glycine max
Glyma.12G194100 10.0kb upstream 10.0kb upstream 10000 false Chr12: 35567962-35577961 Glycine max
Glyma.12G194100 10.0kb downstream 10.0kb downstream 15920 true Chr12: 35577962-35593881 Glycine max
Glyma.12G194100 10.0kb downstream 10.0kb downstream 10000 false Chr12: 35583882-35593881 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122030346 5273 Angiosperm View MSA
122308677 5265 Fabidae View MSA
124066557 5270 Rosid View MSA
123741346 5271 Pentapetalae View MSA
122786927 5272 Eudicot View MSA
121351346 5274 Embryophyte View MSA
123428796 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.0841 0.0 32.2824   High
cufflinks 10.6957 0.0 28.5389    
cufflinks 10.9812 0.0 29.3125    
cufflinks 11.3543 0.0 30.3119    
cufflinks 5.98263 0.0 16.2092   Low
cufflinks 9.23019 0.0 24.6358    
cufflinks 8.3059 0.0 22.2187    
cufflinks 11.5514 0.0 30.8448    
cufflinks 8.01036 0.0 21.4319    
cufflinks 6.235        
cufflinks 1.61       Low
cufflinks 6.189        
cufflinks 3.265        
cufflinks 2.263        
cufflinks 2.709        
cufflinks 11.393     High High
cufflinks 2.83        
cufflinks 5.81        
cufflinks 7.81     High  
cufflinks 15.587     High High
cufflinks 1.835       Low
cufflinks 15.363     High High
cufflinks 11.319     High High
cufflinks 3.265        
cufflinks 12.968     High High
cufflinks 1.698       Low

0 Strain