Gene : Glyma.12G194200 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR18966:SF190 - GLUTAMATE RECEPTOR 3.4-RELATED Genomic Order:  1942
Name:  ? Glyma.12G194200 Secondary Identifier:  ? PAC:30546334
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G194200 0.5kb upstream 0.5kb upstream 6734 true Chr12: 35591809-35598542 Glycine max
Glyma.12G194200 0.5kb upstream 0.5kb upstream 500 false Chr12: 35591809-35592308 Glycine max
Glyma.12G194200 0.5kb downstream 0.5kb downstream 6734 true Chr12: 35592309-35599042 Glycine max
Glyma.12G194200 0.5kb downstream 0.5kb downstream 500 false Chr12: 35598543-35599042 Glycine max
Glyma.12G194200 1.0kb upstream 1.0kb upstream 7234 true Chr12: 35591309-35598542 Glycine max
Glyma.12G194200 1.0kb upstream 1.0kb upstream 1000 false Chr12: 35591309-35592308 Glycine max
Glyma.12G194200 1.0kb downstream 1.0kb downstream 7234 true Chr12: 35592309-35599542 Glycine max
Glyma.12G194200 1.0kb downstream 1.0kb downstream 1000 false Chr12: 35598543-35599542 Glycine max
Glyma.12G194200 2.0kb upstream 2.0kb upstream 8234 true Chr12: 35590309-35598542 Glycine max
Glyma.12G194200 2.0kb upstream 2.0kb upstream 2000 false Chr12: 35590309-35592308 Glycine max
Glyma.12G194200 2.0kb downstream 2.0kb downstream 8234 true Chr12: 35592309-35600542 Glycine max
Glyma.12G194200 2.0kb downstream 2.0kb downstream 2000 false Chr12: 35598543-35600542 Glycine max
Glyma.12G194200 5.0kb upstream 5.0kb upstream 11234 true Chr12: 35587309-35598542 Glycine max
Glyma.12G194200 5.0kb upstream 5.0kb upstream 5000 false Chr12: 35587309-35592308 Glycine max
Glyma.12G194200 5.0kb downstream 5.0kb downstream 11234 true Chr12: 35592309-35603542 Glycine max
Glyma.12G194200 5.0kb downstream 5.0kb downstream 5000 false Chr12: 35598543-35603542 Glycine max
Glyma.12G194200 10.0kb upstream 10.0kb upstream 16234 true Chr12: 35582309-35598542 Glycine max
Glyma.12G194200 10.0kb upstream 10.0kb upstream 10000 false Chr12: 35582309-35592308 Glycine max
Glyma.12G194200 10.0kb downstream 10.0kb downstream 16234 true Chr12: 35592309-35608542 Glycine max
Glyma.12G194200 10.0kb downstream 10.0kb downstream 10000 false Chr12: 35598543-35608542 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309475 5265 Fabidae View MSA
124064754 5270 Rosid View MSA
123739557 5271 Pentapetalae View MSA
122789775 5272 Eudicot View MSA
122045646 5273 Angiosperm View MSA
121348236 5274 Embryophyte View MSA
123428796 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.468785 0.0 3.27505   Low
cufflinks 2.22439 0.0 10.0191    
cufflinks 0.504694 0.0 2.89763   Low
cufflinks 0.850567 0.0 4.67551    
cufflinks 1.98777 0.0 9.04986    
cufflinks 2.40109 0.0 10.5818    
cufflinks 5.47856 0.0 20.0732   High
cufflinks 2.39755 0.0 10.3918    
cufflinks 2.16004 0.0 9.79358    
cufflinks 1.502       High
cufflinks 0.317       Low
cufflinks 0.286       Low
cufflinks 0.54        
cufflinks 0.387        
cufflinks 0.495        
cufflinks 0.479        
cufflinks 0.624        
cufflinks 0.61        
cufflinks 0.437        
cufflinks 0.481        
cufflinks 0.443        
cufflinks 0.487        
cufflinks 0.385        
cufflinks 0.555        
cufflinks 0.479        
cufflinks 0.37        

0 Strain