Gene : Glyma.12G182700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11071:SF213 - PEPTIDYLPROLYL ISOMERASE DOMAIN AND WD REPEAT-CONTAINING PROTEIN 1 Genomic Order:  1827
Name:  ? Glyma.12G182700 Secondary Identifier:  ? PAC:30547231
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G182700 0.5kb upstream 0.5kb upstream 6376 true Chr12: 34377247-34383622 Glycine max
Glyma.12G182700 0.5kb upstream 0.5kb upstream 500 false Chr12: 34377247-34377746 Glycine max
Glyma.12G182700 0.5kb downstream 0.5kb downstream 6376 true Chr12: 34377747-34384122 Glycine max
Glyma.12G182700 0.5kb downstream 0.5kb downstream 500 false Chr12: 34383623-34384122 Glycine max
Glyma.12G182700 1.0kb upstream 1.0kb upstream 6876 true Chr12: 34376747-34383622 Glycine max
Glyma.12G182700 1.0kb upstream 1.0kb upstream 1000 false Chr12: 34376747-34377746 Glycine max
Glyma.12G182700 1.0kb downstream 1.0kb downstream 6876 true Chr12: 34377747-34384622 Glycine max
Glyma.12G182700 1.0kb downstream 1.0kb downstream 1000 false Chr12: 34383623-34384622 Glycine max
Glyma.12G182700 2.0kb upstream 2.0kb upstream 7876 true Chr12: 34375747-34383622 Glycine max
Glyma.12G182700 2.0kb upstream 2.0kb upstream 2000 false Chr12: 34375747-34377746 Glycine max
Glyma.12G182700 2.0kb downstream 2.0kb downstream 7876 true Chr12: 34377747-34385622 Glycine max
Glyma.12G182700 2.0kb downstream 2.0kb downstream 2000 false Chr12: 34383623-34385622 Glycine max
Glyma.12G182700 5.0kb upstream 5.0kb upstream 10876 true Chr12: 34372747-34383622 Glycine max
Glyma.12G182700 5.0kb upstream 5.0kb upstream 5000 false Chr12: 34372747-34377746 Glycine max
Glyma.12G182700 5.0kb downstream 5.0kb downstream 10876 true Chr12: 34377747-34388622 Glycine max
Glyma.12G182700 5.0kb downstream 5.0kb downstream 5000 false Chr12: 34383623-34388622 Glycine max
Glyma.12G182700 10.0kb upstream 10.0kb upstream 15876 true Chr12: 34367747-34383622 Glycine max
Glyma.12G182700 10.0kb upstream 10.0kb upstream 10000 false Chr12: 34367747-34377746 Glycine max
Glyma.12G182700 10.0kb downstream 10.0kb downstream 15876 true Chr12: 34377747-34393622 Glycine max
Glyma.12G182700 10.0kb downstream 10.0kb downstream 10000 false Chr12: 34383623-34393622 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041059 5273 Angiosperm View MSA
122311322 5265 Fabidae View MSA
124067413 5270 Rosid View MSA
123745909 5271 Pentapetalae View MSA
122789860 5272 Eudicot View MSA
121344442 5274 Embryophyte View MSA
123425036 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.96803 0.0 21.5143   Low
cufflinks 12.0937 0.0 32.2725    
cufflinks 8.6585 0.0 23.2649    
cufflinks 11.5502 0.0 30.831    
cufflinks 10.8878 0.0 29.0949    
cufflinks 7.78476 0.0 21.0357   Low
cufflinks 16.4281 0.0 43.9505   High
cufflinks 9.54478 0.0 25.5884    
cufflinks 9.23485 0.0 24.7833    
cufflinks 3.474        
cufflinks 1.684       Low
cufflinks 4.88        
cufflinks 6.533       High
cufflinks 7.589     High High
cufflinks 2.322       Low
cufflinks 4.327        
cufflinks 2.323       Low
cufflinks 5.878        
cufflinks 7.677     High High
cufflinks 3.939        
cufflinks 2.041       Low
cufflinks 4.036        
cufflinks 5.204        
cufflinks 2.37        
cufflinks 4.068        
cufflinks 2.565        

0 Strain