Gene : Glyma.12G183900 G. max Wm82.a2.v1
Defline:  (1 of 17) PTHR10593//PTHR10593:SF27 - SERINE/THREONINE-PROTEIN KINASE RIO Genomic Order:  1839
Name:  ? Glyma.12G183900 Secondary Identifier:  ? PAC:30546161
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G183900 0.5kb upstream 0.5kb upstream 4867 true Chr12: 34507210-34512076 Glycine max
Glyma.12G183900 0.5kb upstream 0.5kb upstream 500 false Chr12: 34511577-34512076 Glycine max
Glyma.12G183900 0.5kb downstream 0.5kb downstream 4867 true Chr12: 34506710-34511576 Glycine max
Glyma.12G183900 0.5kb downstream 0.5kb downstream 500 false Chr12: 34506710-34507209 Glycine max
Glyma.12G183900 1.0kb upstream 1.0kb upstream 5367 true Chr12: 34507210-34512576 Glycine max
Glyma.12G183900 1.0kb upstream 1.0kb upstream 1000 false Chr12: 34511577-34512576 Glycine max
Glyma.12G183900 1.0kb downstream 1.0kb downstream 5367 true Chr12: 34506210-34511576 Glycine max
Glyma.12G183900 1.0kb downstream 1.0kb downstream 1000 false Chr12: 34506210-34507209 Glycine max
Glyma.12G183900 2.0kb upstream 2.0kb upstream 6367 true Chr12: 34507210-34513576 Glycine max
Glyma.12G183900 2.0kb upstream 2.0kb upstream 2000 false Chr12: 34511577-34513576 Glycine max
Glyma.12G183900 2.0kb downstream 2.0kb downstream 6367 true Chr12: 34505210-34511576 Glycine max
Glyma.12G183900 2.0kb downstream 2.0kb downstream 2000 false Chr12: 34505210-34507209 Glycine max
Glyma.12G183900 5.0kb upstream 5.0kb upstream 9367 true Chr12: 34507210-34516576 Glycine max
Glyma.12G183900 5.0kb upstream 5.0kb upstream 5000 false Chr12: 34511577-34516576 Glycine max
Glyma.12G183900 5.0kb downstream 5.0kb downstream 9367 true Chr12: 34502210-34511576 Glycine max
Glyma.12G183900 5.0kb downstream 5.0kb downstream 5000 false Chr12: 34502210-34507209 Glycine max
Glyma.12G183900 10.0kb upstream 10.0kb upstream 14367 true Chr12: 34507210-34521576 Glycine max
Glyma.12G183900 10.0kb upstream 10.0kb upstream 10000 false Chr12: 34511577-34521576 Glycine max
Glyma.12G183900 10.0kb downstream 10.0kb downstream 14367 true Chr12: 34497210-34511576 Glycine max
Glyma.12G183900 10.0kb downstream 10.0kb downstream 10000 false Chr12: 34497210-34507209 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027572 5273 Angiosperm View MSA
122301122 5265 Fabidae View MSA
124060498 5270 Rosid View MSA
123741647 5271 Pentapetalae View MSA
122787233 5272 Eudicot View MSA
121297208 5274 Embryophyte View MSA
123428588 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.405206 0.0 1.51037    
cufflinks 0.611763 0.0 2.22919    
cufflinks 1.70111 0.0 5.64392    
cufflinks 0.359772 0.0 1.3463    
cufflinks 0.161961 0.0 0.629096 Low  
cufflinks 0.0884857 0.0 0.351423 Low Low
cufflinks 0.0938709 0.0 0.372068 Low Low
cufflinks 3.62492 0.0 10.8482   High
cufflinks 1.49803 0.0 5.07402    
cufflinks 0.301        
cufflinks 0.105        
cufflinks 0.557       High
cufflinks 0.004     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.034     Low Low
cufflinks 0.201        
cufflinks 0.057     Low  
cufflinks 0.213        
cufflinks 0.081     Low  
cufflinks 0.266        
cufflinks 0.099        
cufflinks 0.319        
cufflinks 0.172        
cufflinks 0.351        
cufflinks 0.25        
cufflinks 0.066     Low  

0 Strain