Gene : Glyma.12G185600 G. max Wm82.a2.v1
Defline:  (1 of 24) PF11250 - Fantastic Four meristem regulator (FAF) Genomic Order:  1856
Name:  ? Glyma.12G185600 Secondary Identifier:  ? PAC:30548923
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G185600 0.5kb upstream 0.5kb upstream 1899 true Chr12: 34657182-34659080 Glycine max
Glyma.12G185600 0.5kb upstream 0.5kb upstream 500 false Chr12: 34657182-34657681 Glycine max
Glyma.12G185600 0.5kb downstream 0.5kb downstream 1899 true Chr12: 34657682-34659580 Glycine max
Glyma.12G185600 0.5kb downstream 0.5kb downstream 500 false Chr12: 34659081-34659580 Glycine max
Glyma.12G185600 1.0kb upstream 1.0kb upstream 2399 true Chr12: 34656682-34659080 Glycine max
Glyma.12G185600 1.0kb upstream 1.0kb upstream 1000 false Chr12: 34656682-34657681 Glycine max
Glyma.12G185600 1.0kb downstream 1.0kb downstream 2399 true Chr12: 34657682-34660080 Glycine max
Glyma.12G185600 1.0kb downstream 1.0kb downstream 1000 false Chr12: 34659081-34660080 Glycine max
Glyma.12G185600 2.0kb upstream 2.0kb upstream 3399 true Chr12: 34655682-34659080 Glycine max
Glyma.12G185600 2.0kb upstream 2.0kb upstream 2000 false Chr12: 34655682-34657681 Glycine max
Glyma.12G185600 2.0kb downstream 2.0kb downstream 3399 true Chr12: 34657682-34661080 Glycine max
Glyma.12G185600 2.0kb downstream 2.0kb downstream 2000 false Chr12: 34659081-34661080 Glycine max
Glyma.12G185600 5.0kb upstream 5.0kb upstream 6399 true Chr12: 34652682-34659080 Glycine max
Glyma.12G185600 5.0kb upstream 5.0kb upstream 5000 false Chr12: 34652682-34657681 Glycine max
Glyma.12G185600 5.0kb downstream 5.0kb downstream 6399 true Chr12: 34657682-34664080 Glycine max
Glyma.12G185600 5.0kb downstream 5.0kb downstream 5000 false Chr12: 34659081-34664080 Glycine max
Glyma.12G185600 10.0kb upstream 10.0kb upstream 11399 true Chr12: 34647682-34659080 Glycine max
Glyma.12G185600 10.0kb upstream 10.0kb upstream 10000 false Chr12: 34647682-34657681 Glycine max
Glyma.12G185600 10.0kb downstream 10.0kb downstream 11399 true Chr12: 34657682-34669080 Glycine max
Glyma.12G185600 10.0kb downstream 10.0kb downstream 10000 false Chr12: 34659081-34669080 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309919 5265 Fabidae View MSA
124069598 5270 Rosid View MSA
123752468 5271 Pentapetalae View MSA
122797002 5272 Eudicot View MSA
122048900 5273 Angiosperm View MSA
121311160 5274 Embryophyte View MSA
123348494 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.68427 0.0 21.7944   High
cufflinks 0.698103 0.0 2.56714    
cufflinks 0.455371 0.0 1.70699    
cufflinks 0.57237 0.0 2.12395    
cufflinks 0.0813916 0.0 0.327983 Low Low
cufflinks 0.236661 0.0 0.915617 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.105239 0.0 0.419021 Low  
cufflinks 0.109776 0.0 0.436975 Low  
cufflinks 0.154        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.619        
cufflinks 0.315        
cufflinks 0.221        
cufflinks 0.23        
cufflinks 9.18     High High
cufflinks 0.033     Low Low
cufflinks 0.617        
cufflinks 0.303        
cufflinks 4.687       High
cufflinks 0.03     Low Low
cufflinks 9.728     High High
cufflinks 7.874     High High
cufflinks 0.014     Low Low
cufflinks 4.579       High
cufflinks 0.039     Low Low

0 Strain