Gene : Glyma.12G185700 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR23088:SF26 - N-CARBAMOYLPUTRESCINE AMIDASE Genomic Order:  1857
Name:  ? Glyma.12G185700 Secondary Identifier:  ? PAC:30546448
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax POLYAMINSYN3-PWY Glycine max pathologic  
Gmax PWY-43 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G185700 0.5kb upstream 0.5kb upstream 4714 true Chr12: 34661426-34666139 Glycine max
Glyma.12G185700 0.5kb upstream 0.5kb upstream 500 false Chr12: 34665640-34666139 Glycine max
Glyma.12G185700 0.5kb downstream 0.5kb downstream 4714 true Chr12: 34660926-34665639 Glycine max
Glyma.12G185700 0.5kb downstream 0.5kb downstream 500 false Chr12: 34660926-34661425 Glycine max
Glyma.12G185700 1.0kb upstream 1.0kb upstream 5214 true Chr12: 34661426-34666639 Glycine max
Glyma.12G185700 1.0kb upstream 1.0kb upstream 1000 false Chr12: 34665640-34666639 Glycine max
Glyma.12G185700 1.0kb downstream 1.0kb downstream 5214 true Chr12: 34660426-34665639 Glycine max
Glyma.12G185700 1.0kb downstream 1.0kb downstream 1000 false Chr12: 34660426-34661425 Glycine max
Glyma.12G185700 2.0kb upstream 2.0kb upstream 6214 true Chr12: 34661426-34667639 Glycine max
Glyma.12G185700 2.0kb upstream 2.0kb upstream 2000 false Chr12: 34665640-34667639 Glycine max
Glyma.12G185700 2.0kb downstream 2.0kb downstream 6214 true Chr12: 34659426-34665639 Glycine max
Glyma.12G185700 2.0kb downstream 2.0kb downstream 2000 false Chr12: 34659426-34661425 Glycine max
Glyma.12G185700 5.0kb upstream 5.0kb upstream 9214 true Chr12: 34661426-34670639 Glycine max
Glyma.12G185700 5.0kb upstream 5.0kb upstream 5000 false Chr12: 34665640-34670639 Glycine max
Glyma.12G185700 5.0kb downstream 5.0kb downstream 9214 true Chr12: 34656426-34665639 Glycine max
Glyma.12G185700 5.0kb downstream 5.0kb downstream 5000 false Chr12: 34656426-34661425 Glycine max
Glyma.12G185700 10.0kb upstream 10.0kb upstream 14214 true Chr12: 34661426-34675639 Glycine max
Glyma.12G185700 10.0kb upstream 10.0kb upstream 10000 false Chr12: 34665640-34675639 Glycine max
Glyma.12G185700 10.0kb downstream 10.0kb downstream 14214 true Chr12: 34651426-34665639 Glycine max
Glyma.12G185700 10.0kb downstream 10.0kb downstream 10000 false Chr12: 34651426-34661425 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303763 5265 Fabidae View MSA
124064750 5270 Rosid View MSA
123740883 5271 Pentapetalae View MSA
122790210 5272 Eudicot View MSA
122048045 5273 Angiosperm View MSA
121345187 5274 Embryophyte View MSA
123425412 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.41692 0.0 9.10637   Low
cufflinks 3.65002 0.0 12.3665    
cufflinks 3.56145 0.0 15.7736    
cufflinks 5.3525 0.0 16.0912    
cufflinks 7.10944 0.0 25.5456    
cufflinks 4.83435 0.0 14.9088    
cufflinks 10.9155 0.0 35.4184   High
cufflinks 5.33709 0.0 16.0882    
cufflinks 8.27728 0.0 33.8602   High
cufflinks 0.484        
cufflinks 0.186       Low
cufflinks 0.544        
cufflinks 1.393       High
cufflinks 1.713       High
cufflinks 0.673        
cufflinks 0.317        
cufflinks 0.417        
cufflinks 0.81       High
cufflinks 0.391        
cufflinks 0.194       Low
cufflinks 0.337        
cufflinks 0.217       Low
cufflinks 0.32        
cufflinks 0.306        
cufflinks 0.236        
cufflinks 0.374        

0 Strain