Gene : Glyma.12G186200 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31989:SF4 - NAC DOMAIN-CONTAINING PROTEIN 61-RELATED Genomic Order:  1862
Name:  ? Glyma.12G186200 Secondary Identifier:  ? PAC:30546131
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G186200 0.5kb upstream 0.5kb upstream 2372 true Chr12: 34708178-34710549 Glycine max
Glyma.12G186200 0.5kb upstream 0.5kb upstream 500 false Chr12: 34708178-34708677 Glycine max
Glyma.12G186200 0.5kb downstream 0.5kb downstream 2372 true Chr12: 34708678-34711049 Glycine max
Glyma.12G186200 0.5kb downstream 0.5kb downstream 500 false Chr12: 34710550-34711049 Glycine max
Glyma.12G186200 1.0kb upstream 1.0kb upstream 2872 true Chr12: 34707678-34710549 Glycine max
Glyma.12G186200 1.0kb upstream 1.0kb upstream 1000 false Chr12: 34707678-34708677 Glycine max
Glyma.12G186200 1.0kb downstream 1.0kb downstream 2872 true Chr12: 34708678-34711549 Glycine max
Glyma.12G186200 1.0kb downstream 1.0kb downstream 1000 false Chr12: 34710550-34711549 Glycine max
Glyma.12G186200 2.0kb upstream 2.0kb upstream 3872 true Chr12: 34706678-34710549 Glycine max
Glyma.12G186200 2.0kb upstream 2.0kb upstream 2000 false Chr12: 34706678-34708677 Glycine max
Glyma.12G186200 2.0kb downstream 2.0kb downstream 3872 true Chr12: 34708678-34712549 Glycine max
Glyma.12G186200 2.0kb downstream 2.0kb downstream 2000 false Chr12: 34710550-34712549 Glycine max
Glyma.12G186200 5.0kb upstream 5.0kb upstream 6872 true Chr12: 34703678-34710549 Glycine max
Glyma.12G186200 5.0kb upstream 5.0kb upstream 5000 false Chr12: 34703678-34708677 Glycine max
Glyma.12G186200 5.0kb downstream 5.0kb downstream 6872 true Chr12: 34708678-34715549 Glycine max
Glyma.12G186200 5.0kb downstream 5.0kb downstream 5000 false Chr12: 34710550-34715549 Glycine max
Glyma.12G186200 10.0kb upstream 10.0kb upstream 11872 true Chr12: 34698678-34710549 Glycine max
Glyma.12G186200 10.0kb upstream 10.0kb upstream 10000 false Chr12: 34698678-34708677 Glycine max
Glyma.12G186200 10.0kb downstream 10.0kb downstream 11872 true Chr12: 34708678-34720549 Glycine max
Glyma.12G186200 10.0kb downstream 10.0kb downstream 10000 false Chr12: 34710550-34720549 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309486 5265 Fabidae View MSA
124064044 5270 Rosid View MSA
123746448 5271 Pentapetalae View MSA
122785794 5272 Eudicot View MSA
122050248 5273 Angiosperm View MSA
121311822 5274 Embryophyte View MSA
123349064 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.316423 0.0 1.21109   High
cufflinks 0.0323174 0.0 0.138038 Low  
cufflinks 0.395121 0.0 1.49676   High
cufflinks 0.0179762 0.0 0.0806633 Low Low
cufflinks 0.0844856 0.0 0.340452 Low  
cufflinks 0.155767 0.0 0.613736 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0802248 0.0 0.323632 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 22.544     High High
cufflinks 5.941     High  
cufflinks 1.886        
cufflinks 0.113       Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.752        
cufflinks 2.599        
cufflinks 75.744     High High
cufflinks 1.71        
cufflinks 0.255       Low
cufflinks 0.813        
cufflinks 1.993        
cufflinks 1.673        
cufflinks 2.531        
cufflinks 2.171        
cufflinks 0.879        
cufflinks 7.831     High  

0 Strain