Gene : Glyma.12G187500 G. max Wm82.a2.v1
Defline:  (1 of 8) PTHR33057:SF17 - GB Genomic Order:  1875
Name:  ? Glyma.12G187500 Secondary Identifier:  ? PAC:30545589
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G187500 0.5kb upstream 0.5kb upstream 1061 true Chr12: 34858389-34859449 Glycine max
Glyma.12G187500 0.5kb upstream 0.5kb upstream 500 false Chr12: 34858950-34859449 Glycine max
Glyma.12G187500 0.5kb downstream 0.5kb downstream 1061 true Chr12: 34857889-34858949 Glycine max
Glyma.12G187500 0.5kb downstream 0.5kb downstream 500 false Chr12: 34857889-34858388 Glycine max
Glyma.12G187500 1.0kb upstream 1.0kb upstream 1561 true Chr12: 34858389-34859949 Glycine max
Glyma.12G187500 1.0kb upstream 1.0kb upstream 1000 false Chr12: 34858950-34859949 Glycine max
Glyma.12G187500 1.0kb downstream 1.0kb downstream 1561 true Chr12: 34857389-34858949 Glycine max
Glyma.12G187500 1.0kb downstream 1.0kb downstream 1000 false Chr12: 34857389-34858388 Glycine max
Glyma.12G187500 2.0kb upstream 2.0kb upstream 2561 true Chr12: 34858389-34860949 Glycine max
Glyma.12G187500 2.0kb upstream 2.0kb upstream 2000 false Chr12: 34858950-34860949 Glycine max
Glyma.12G187500 2.0kb downstream 2.0kb downstream 2561 true Chr12: 34856389-34858949 Glycine max
Glyma.12G187500 2.0kb downstream 2.0kb downstream 2000 false Chr12: 34856389-34858388 Glycine max
Glyma.12G187500 5.0kb upstream 5.0kb upstream 5561 true Chr12: 34858389-34863949 Glycine max
Glyma.12G187500 5.0kb upstream 5.0kb upstream 5000 false Chr12: 34858950-34863949 Glycine max
Glyma.12G187500 5.0kb downstream 5.0kb downstream 5561 true Chr12: 34853389-34858949 Glycine max
Glyma.12G187500 5.0kb downstream 5.0kb downstream 5000 false Chr12: 34853389-34858388 Glycine max
Glyma.12G187500 10.0kb upstream 10.0kb upstream 10561 true Chr12: 34858389-34868949 Glycine max
Glyma.12G187500 10.0kb upstream 10.0kb upstream 10000 false Chr12: 34858950-34868949 Glycine max
Glyma.12G187500 10.0kb downstream 10.0kb downstream 10561 true Chr12: 34848389-34858949 Glycine max
Glyma.12G187500 10.0kb downstream 10.0kb downstream 10000 false Chr12: 34848389-34858388 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315278 5265 Fabidae View MSA
124070173 5270 Rosid View MSA
123748591 5271 Pentapetalae View MSA
122791158 5272 Eudicot View MSA
122048787 5273 Angiosperm View MSA
121311113 5274 Embryophyte View MSA
123348456 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0441678 0.0 0.19975 Low Low
cufflinks 0.65595 0.0 2.5403    
cufflinks 0.676566 0.0 2.62505    
cufflinks 0.0717749 0.0 0.310898 Low  
cufflinks 0.869013 0.0 3.3161    
cufflinks 0.252598 0.0 1.01404 Low  
cufflinks 0.341884 0.0 1.3551    
cufflinks 0.0422711 0.0 0.191317 Low Low
cufflinks 1.71695 0.0 6.35939   High
cufflinks 0.619        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.121        
cufflinks 0.055     Low Low
cufflinks 0.152       Low
cufflinks 2.242        
cufflinks 4.707        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.456        
cufflinks 0.614        
cufflinks 5.281        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 3.505        
cufflinks 4.283        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 3.913        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain