Gene : Glyma.12G187700 G. max Wm82.a2.v1
Defline:  (1 of 8) PTHR24362:SF258 - SERINE/THREONINE-PROTEIN KINASE NEK5 Genomic Order:  1877
Name:  ? Glyma.12G187700 Secondary Identifier:  ? PAC:30547700
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G187700 0.5kb upstream 0.5kb upstream 8310 true Chr12: 34879228-34887537 Glycine max
Glyma.12G187700 0.5kb upstream 0.5kb upstream 500 false Chr12: 34887038-34887537 Glycine max
Glyma.12G187700 0.5kb downstream 0.5kb downstream 8310 true Chr12: 34878728-34887037 Glycine max
Glyma.12G187700 0.5kb downstream 0.5kb downstream 500 false Chr12: 34878728-34879227 Glycine max
Glyma.12G187700 1.0kb upstream 1.0kb upstream 8810 true Chr12: 34879228-34888037 Glycine max
Glyma.12G187700 1.0kb upstream 1.0kb upstream 1000 false Chr12: 34887038-34888037 Glycine max
Glyma.12G187700 1.0kb downstream 1.0kb downstream 8810 true Chr12: 34878228-34887037 Glycine max
Glyma.12G187700 1.0kb downstream 1.0kb downstream 1000 false Chr12: 34878228-34879227 Glycine max
Glyma.12G187700 2.0kb upstream 2.0kb upstream 9810 true Chr12: 34879228-34889037 Glycine max
Glyma.12G187700 2.0kb upstream 2.0kb upstream 2000 false Chr12: 34887038-34889037 Glycine max
Glyma.12G187700 2.0kb downstream 2.0kb downstream 9810 true Chr12: 34877228-34887037 Glycine max
Glyma.12G187700 2.0kb downstream 2.0kb downstream 2000 false Chr12: 34877228-34879227 Glycine max
Glyma.12G187700 5.0kb upstream 5.0kb upstream 12810 true Chr12: 34879228-34892037 Glycine max
Glyma.12G187700 5.0kb upstream 5.0kb upstream 5000 false Chr12: 34887038-34892037 Glycine max
Glyma.12G187700 5.0kb downstream 5.0kb downstream 12810 true Chr12: 34874228-34887037 Glycine max
Glyma.12G187700 5.0kb downstream 5.0kb downstream 5000 false Chr12: 34874228-34879227 Glycine max
Glyma.12G187700 10.0kb upstream 10.0kb upstream 17810 true Chr12: 34879228-34897037 Glycine max
Glyma.12G187700 10.0kb upstream 10.0kb upstream 10000 false Chr12: 34887038-34897037 Glycine max
Glyma.12G187700 10.0kb downstream 10.0kb downstream 17810 true Chr12: 34869228-34887037 Glycine max
Glyma.12G187700 10.0kb downstream 10.0kb downstream 10000 false Chr12: 34869228-34879227 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309247 5265 Fabidae View MSA
124063961 5270 Rosid View MSA
123747232 5271 Pentapetalae View MSA
122789599 5272 Eudicot View MSA
122047293 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351770 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.96452 0.0 5.74175   Low
cufflinks 4.86451 0.0 13.1038    
cufflinks 2.94504 0.0 8.20056    
cufflinks 9.49424 0.0 25.4069   High
cufflinks 4.90503 0.0 13.2112    
cufflinks 3.69021 0.0 10.1    
cufflinks 3.77345 0.0 10.3315    
cufflinks 7.55999 0.0 20.1693   High
cufflinks 4.64675 0.0 12.5405    
cufflinks 5.399       High
cufflinks 1.403       Low
cufflinks 2.901        
cufflinks 3.94        
cufflinks 3.052        
cufflinks 1.091       Low
cufflinks 3.486        
cufflinks 1.459       Low
cufflinks 4.112        
cufflinks 4.018        
cufflinks 3.284        
cufflinks 3.31        
cufflinks 3.451        
cufflinks 3.087        
cufflinks 1.787       Low
cufflinks 3.181        
cufflinks 2.141        

0 Strain