Gene : Glyma.12G189400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR15606:SF4 - PROTEIN DNJ-30 Genomic Order:  1894
Name:  ? Glyma.12G189400 Secondary Identifier:  ? PAC:30547497
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G189400 0.5kb upstream 0.5kb upstream 6243 true Chr12: 35099714-35105956 Glycine max
Glyma.12G189400 0.5kb upstream 0.5kb upstream 500 false Chr12: 35099714-35100213 Glycine max
Glyma.12G189400 0.5kb downstream 0.5kb downstream 6243 true Chr12: 35100214-35106456 Glycine max
Glyma.12G189400 0.5kb downstream 0.5kb downstream 500 false Chr12: 35105957-35106456 Glycine max
Glyma.12G189400 1.0kb upstream 1.0kb upstream 6743 true Chr12: 35099214-35105956 Glycine max
Glyma.12G189400 1.0kb upstream 1.0kb upstream 1000 false Chr12: 35099214-35100213 Glycine max
Glyma.12G189400 1.0kb downstream 1.0kb downstream 6743 true Chr12: 35100214-35106956 Glycine max
Glyma.12G189400 1.0kb downstream 1.0kb downstream 1000 false Chr12: 35105957-35106956 Glycine max
Glyma.12G189400 2.0kb upstream 2.0kb upstream 7743 true Chr12: 35098214-35105956 Glycine max
Glyma.12G189400 2.0kb upstream 2.0kb upstream 2000 false Chr12: 35098214-35100213 Glycine max
Glyma.12G189400 2.0kb downstream 2.0kb downstream 7743 true Chr12: 35100214-35107956 Glycine max
Glyma.12G189400 2.0kb downstream 2.0kb downstream 2000 false Chr12: 35105957-35107956 Glycine max
Glyma.12G189400 5.0kb upstream 5.0kb upstream 10743 true Chr12: 35095214-35105956 Glycine max
Glyma.12G189400 5.0kb upstream 5.0kb upstream 5000 false Chr12: 35095214-35100213 Glycine max
Glyma.12G189400 5.0kb downstream 5.0kb downstream 10743 true Chr12: 35100214-35110956 Glycine max
Glyma.12G189400 5.0kb downstream 5.0kb downstream 5000 false Chr12: 35105957-35110956 Glycine max
Glyma.12G189400 10.0kb upstream 10.0kb upstream 15743 true Chr12: 35090214-35105956 Glycine max
Glyma.12G189400 10.0kb upstream 10.0kb upstream 10000 false Chr12: 35090214-35100213 Glycine max
Glyma.12G189400 10.0kb downstream 10.0kb downstream 15743 true Chr12: 35100214-35115956 Glycine max
Glyma.12G189400 10.0kb downstream 10.0kb downstream 10000 false Chr12: 35105957-35115956 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305182 5265 Fabidae View MSA
124063968 5270 Rosid View MSA
123737354 5271 Pentapetalae View MSA
122788109 5272 Eudicot View MSA
122043518 5273 Angiosperm View MSA
121344591 5274 Embryophyte View MSA
123424933 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.77437 0.0 24.171   High
cufflinks 5.84366 0.0 16.769    
cufflinks 6.30423 0.0 17.8558    
cufflinks 6.85502 0.0 19.2611    
cufflinks 5.81557 0.0 16.721    
cufflinks 7.44919 0.0 20.8472    
cufflinks 5.31121 0.0 15.4898   Low
cufflinks 7.92672 0.0 22.002    
cufflinks 7.08952 0.0 19.9213    
cufflinks 1.486       Low
cufflinks 2.617        
cufflinks 2.492        
cufflinks 2.546        
cufflinks 2.334        
cufflinks 2.243        
cufflinks 1.901        
cufflinks 1.106       Low
cufflinks 2.661        
cufflinks 1.352       Low
cufflinks 1.858        
cufflinks 2.916       High
cufflinks 1.949        
cufflinks 1.694        
cufflinks 2.803       High
cufflinks 2.156        
cufflinks 2.164        

0 Strain