Gene : Glyma.12G189500 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR11668//PTHR11668:SF243 - SERINE/THREONINE PROTEIN PHOSPHATASE Genomic Order:  1895
Name:  ? Glyma.12G189500 Secondary Identifier:  ? PAC:30547019
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G189500 0.5kb upstream 0.5kb upstream 12791 true Chr12: 35106021-35118811 Glycine max
Glyma.12G189500 0.5kb upstream 0.5kb upstream 500 false Chr12: 35118312-35118811 Glycine max
Glyma.12G189500 0.5kb downstream 0.5kb downstream 12791 true Chr12: 35105521-35118311 Glycine max
Glyma.12G189500 0.5kb downstream 0.5kb downstream 500 false Chr12: 35105521-35106020 Glycine max
Glyma.12G189500 1.0kb upstream 1.0kb upstream 13291 true Chr12: 35106021-35119311 Glycine max
Glyma.12G189500 1.0kb upstream 1.0kb upstream 1000 false Chr12: 35118312-35119311 Glycine max
Glyma.12G189500 1.0kb downstream 1.0kb downstream 13291 true Chr12: 35105021-35118311 Glycine max
Glyma.12G189500 1.0kb downstream 1.0kb downstream 1000 false Chr12: 35105021-35106020 Glycine max
Glyma.12G189500 2.0kb upstream 2.0kb upstream 14291 true Chr12: 35106021-35120311 Glycine max
Glyma.12G189500 2.0kb upstream 2.0kb upstream 2000 false Chr12: 35118312-35120311 Glycine max
Glyma.12G189500 2.0kb downstream 2.0kb downstream 14291 true Chr12: 35104021-35118311 Glycine max
Glyma.12G189500 2.0kb downstream 2.0kb downstream 2000 false Chr12: 35104021-35106020 Glycine max
Glyma.12G189500 5.0kb upstream 5.0kb upstream 17291 true Chr12: 35106021-35123311 Glycine max
Glyma.12G189500 5.0kb upstream 5.0kb upstream 5000 false Chr12: 35118312-35123311 Glycine max
Glyma.12G189500 5.0kb downstream 5.0kb downstream 17291 true Chr12: 35101021-35118311 Glycine max
Glyma.12G189500 5.0kb downstream 5.0kb downstream 5000 false Chr12: 35101021-35106020 Glycine max
Glyma.12G189500 10.0kb upstream 10.0kb upstream 22291 true Chr12: 35106021-35128311 Glycine max
Glyma.12G189500 10.0kb upstream 10.0kb upstream 10000 false Chr12: 35118312-35128311 Glycine max
Glyma.12G189500 10.0kb downstream 10.0kb downstream 22291 true Chr12: 35096021-35118311 Glycine max
Glyma.12G189500 10.0kb downstream 10.0kb downstream 10000 false Chr12: 35096021-35106020 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312704 5265 Fabidae View MSA
124066080 5270 Rosid View MSA
123748320 5271 Pentapetalae View MSA
122790760 5272 Eudicot View MSA
122049960 5273 Angiosperm View MSA
121349504 5274 Embryophyte View MSA
123428379 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.10578 0.0 18.8253    
cufflinks 3.65335 0.0 13.1604    
cufflinks 6.21082 0.0 18.5547    
cufflinks 6.2307 0.0 21.3294    
cufflinks 5.22767 0.0 20.3692    
cufflinks 2.38284 0.0 8.03359   Low
cufflinks 5.67283 0.0 19.6258    
cufflinks 6.01998 0.0 20.7208    
cufflinks 5.07333 0.0 17.726    
cufflinks 0.812        
cufflinks 0.846        
cufflinks 0.692        
cufflinks 0.673        
cufflinks 0.799        
cufflinks 0.836        
cufflinks 0.685        
cufflinks 1.017       High
cufflinks 0.708        
cufflinks 0.8        
cufflinks 0.679        
cufflinks 0.824        
cufflinks 0.695        
cufflinks 0.654       Low
cufflinks 0.828        
cufflinks 0.587       Low
cufflinks 0.878       High

0 Strain