Gene : Glyma.12G178200 G. max Wm82.a2.v1
Defline:  (1 of 13) PF07795 - Protein of unknown function (DUF1635) (DUF1635) Genomic Order:  1782
Name:  ? Glyma.12G178200 Secondary Identifier:  ? PAC:30547766
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G178200 0.5kb upstream 0.5kb upstream 2351 true Chr12: 33792338-33794688 Glycine max
Glyma.12G178200 0.5kb upstream 0.5kb upstream 500 false Chr12: 33792338-33792837 Glycine max
Glyma.12G178200 0.5kb downstream 0.5kb downstream 2351 true Chr12: 33792838-33795188 Glycine max
Glyma.12G178200 0.5kb downstream 0.5kb downstream 500 false Chr12: 33794689-33795188 Glycine max
Glyma.12G178200 1.0kb upstream 1.0kb upstream 2851 true Chr12: 33791838-33794688 Glycine max
Glyma.12G178200 1.0kb upstream 1.0kb upstream 1000 false Chr12: 33791838-33792837 Glycine max
Glyma.12G178200 1.0kb downstream 1.0kb downstream 2851 true Chr12: 33792838-33795688 Glycine max
Glyma.12G178200 1.0kb downstream 1.0kb downstream 1000 false Chr12: 33794689-33795688 Glycine max
Glyma.12G178200 2.0kb upstream 2.0kb upstream 3851 true Chr12: 33790838-33794688 Glycine max
Glyma.12G178200 2.0kb upstream 2.0kb upstream 2000 false Chr12: 33790838-33792837 Glycine max
Glyma.12G178200 2.0kb downstream 2.0kb downstream 3851 true Chr12: 33792838-33796688 Glycine max
Glyma.12G178200 2.0kb downstream 2.0kb downstream 2000 false Chr12: 33794689-33796688 Glycine max
Glyma.12G178200 5.0kb upstream 5.0kb upstream 6851 true Chr12: 33787838-33794688 Glycine max
Glyma.12G178200 5.0kb upstream 5.0kb upstream 5000 false Chr12: 33787838-33792837 Glycine max
Glyma.12G178200 5.0kb downstream 5.0kb downstream 6851 true Chr12: 33792838-33799688 Glycine max
Glyma.12G178200 5.0kb downstream 5.0kb downstream 5000 false Chr12: 33794689-33799688 Glycine max
Glyma.12G178200 10.0kb upstream 10.0kb upstream 11851 true Chr12: 33782838-33794688 Glycine max
Glyma.12G178200 10.0kb upstream 10.0kb upstream 10000 false Chr12: 33782838-33792837 Glycine max
Glyma.12G178200 10.0kb downstream 10.0kb downstream 11851 true Chr12: 33792838-33804688 Glycine max
Glyma.12G178200 10.0kb downstream 10.0kb downstream 10000 false Chr12: 33794689-33804688 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307982 5265 Fabidae View MSA
124069080 5270 Rosid View MSA
123751096 5271 Pentapetalae View MSA
122788553 5272 Eudicot View MSA
122048451 5273 Angiosperm View MSA
121310976 5274 Embryophyte View MSA
123348340 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.58064 0.0 5.40905   Low
cufflinks 2.0138 0.0 6.67893    
cufflinks 3.81261 0.0 11.5342    
cufflinks 32.7631 0.0 88.7633 High High
cufflinks 6.18894 0.0 17.6682    
cufflinks 6.62292 0.0 18.756    
cufflinks 2.36956 0.0 7.70621    
cufflinks 43.3659 0.0 120.17 High High
cufflinks 11.013 0.0 29.8512    
cufflinks 37.632     High High
cufflinks 0.19       Low
cufflinks 5.377       High
cufflinks 3.943        
cufflinks 1.821        
cufflinks 0.49        
cufflinks 1.854        
cufflinks 0.613        
cufflinks 3.743        
cufflinks 1.849        
cufflinks 1.085        
cufflinks 0.375       Low
cufflinks 1.222        
cufflinks 2.246        
cufflinks 0.383       Low
cufflinks 1.227        
cufflinks 0.437        

0 Strain