Gene : Glyma.12G178500 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31945:SF17 - TRANSCRIPTION FACTOR FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR Genomic Order:  1785
Name:  ? Glyma.12G178500 Secondary Identifier:  ? PAC:30547545
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G178500 0.5kb upstream 0.5kb upstream 2405 true Chr12: 33839902-33842306 Glycine max
Glyma.12G178500 0.5kb upstream 0.5kb upstream 500 false Chr12: 33839902-33840401 Glycine max
Glyma.12G178500 0.5kb downstream 0.5kb downstream 2405 true Chr12: 33840402-33842806 Glycine max
Glyma.12G178500 0.5kb downstream 0.5kb downstream 500 false Chr12: 33842307-33842806 Glycine max
Glyma.12G178500 1.0kb upstream 1.0kb upstream 2905 true Chr12: 33839402-33842306 Glycine max
Glyma.12G178500 1.0kb upstream 1.0kb upstream 1000 false Chr12: 33839402-33840401 Glycine max
Glyma.12G178500 1.0kb downstream 1.0kb downstream 2905 true Chr12: 33840402-33843306 Glycine max
Glyma.12G178500 1.0kb downstream 1.0kb downstream 1000 false Chr12: 33842307-33843306 Glycine max
Glyma.12G178500 2.0kb upstream 2.0kb upstream 3905 true Chr12: 33838402-33842306 Glycine max
Glyma.12G178500 2.0kb upstream 2.0kb upstream 2000 false Chr12: 33838402-33840401 Glycine max
Glyma.12G178500 2.0kb downstream 2.0kb downstream 3905 true Chr12: 33840402-33844306 Glycine max
Glyma.12G178500 2.0kb downstream 2.0kb downstream 2000 false Chr12: 33842307-33844306 Glycine max
Glyma.12G178500 5.0kb upstream 5.0kb upstream 6905 true Chr12: 33835402-33842306 Glycine max
Glyma.12G178500 5.0kb upstream 5.0kb upstream 5000 false Chr12: 33835402-33840401 Glycine max
Glyma.12G178500 5.0kb downstream 5.0kb downstream 6905 true Chr12: 33840402-33847306 Glycine max
Glyma.12G178500 5.0kb downstream 5.0kb downstream 5000 false Chr12: 33842307-33847306 Glycine max
Glyma.12G178500 10.0kb upstream 10.0kb upstream 11905 true Chr12: 33830402-33842306 Glycine max
Glyma.12G178500 10.0kb upstream 10.0kb upstream 10000 false Chr12: 33830402-33840401 Glycine max
Glyma.12G178500 10.0kb downstream 10.0kb downstream 11905 true Chr12: 33840402-33852306 Glycine max
Glyma.12G178500 10.0kb downstream 10.0kb downstream 10000 false Chr12: 33842307-33852306 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315179 5265 Fabidae View MSA
124063939 5270 Rosid View MSA
123751108 5271 Pentapetalae View MSA
122786692 5272 Eudicot View MSA
122047827 5273 Angiosperm View MSA
121351451 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0149675 0.0 0.0676907 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.118923 0.0 0.470771 Low  
cufflinks 1.08868 0.0 3.88501    
cufflinks 2.66233 0.0 8.65594    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0728018 0.0 0.293687 Low  
cufflinks 5.7816 0.0 16.8328   High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.072        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.539       High
cufflinks 0.022     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.509        
cufflinks 0.008     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.072        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.071        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.752       High

0 Strain