Gene : Glyma.12G179700 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR11010:SF47 - PROLYLCARBOXYPEPTIDASE-LIKE PROTEIN-RELATED Genomic Order:  1797
Name:  ? Glyma.12G179700 Secondary Identifier:  ? PAC:30546885
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G179700 0.5kb upstream 0.5kb upstream 4996 true Chr12: 34001660-34006655 Glycine max
Glyma.12G179700 0.5kb upstream 0.5kb upstream 500 false Chr12: 34001660-34002159 Glycine max
Glyma.12G179700 0.5kb downstream 0.5kb downstream 4996 true Chr12: 34002160-34007155 Glycine max
Glyma.12G179700 0.5kb downstream 0.5kb downstream 500 false Chr12: 34006656-34007155 Glycine max
Glyma.12G179700 1.0kb upstream 1.0kb upstream 5496 true Chr12: 34001160-34006655 Glycine max
Glyma.12G179700 1.0kb upstream 1.0kb upstream 1000 false Chr12: 34001160-34002159 Glycine max
Glyma.12G179700 1.0kb downstream 1.0kb downstream 5496 true Chr12: 34002160-34007655 Glycine max
Glyma.12G179700 1.0kb downstream 1.0kb downstream 1000 false Chr12: 34006656-34007655 Glycine max
Glyma.12G179700 2.0kb upstream 2.0kb upstream 6496 true Chr12: 34000160-34006655 Glycine max
Glyma.12G179700 2.0kb upstream 2.0kb upstream 2000 false Chr12: 34000160-34002159 Glycine max
Glyma.12G179700 2.0kb downstream 2.0kb downstream 6496 true Chr12: 34002160-34008655 Glycine max
Glyma.12G179700 2.0kb downstream 2.0kb downstream 2000 false Chr12: 34006656-34008655 Glycine max
Glyma.12G179700 5.0kb upstream 5.0kb upstream 9496 true Chr12: 33997160-34006655 Glycine max
Glyma.12G179700 5.0kb upstream 5.0kb upstream 5000 false Chr12: 33997160-34002159 Glycine max
Glyma.12G179700 5.0kb downstream 5.0kb downstream 9496 true Chr12: 34002160-34011655 Glycine max
Glyma.12G179700 5.0kb downstream 5.0kb downstream 5000 false Chr12: 34006656-34011655 Glycine max
Glyma.12G179700 10.0kb upstream 10.0kb upstream 14496 true Chr12: 33992160-34006655 Glycine max
Glyma.12G179700 10.0kb upstream 10.0kb upstream 10000 false Chr12: 33992160-34002159 Glycine max
Glyma.12G179700 10.0kb downstream 10.0kb downstream 14496 true Chr12: 34002160-34016655 Glycine max
Glyma.12G179700 10.0kb downstream 10.0kb downstream 10000 false Chr12: 34006656-34016655 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122253552 5265 Fabidae View MSA
124071950 5270 Rosid View MSA
123748815 5271 Pentapetalae View MSA
122796737 5272 Eudicot View MSA
122049838 5273 Angiosperm View MSA
121344690 5274 Embryophyte View MSA
123428837 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.174311 0.0 0.672254 Low  
cufflinks 0.0210445 0.0 0.089888 Low Low
cufflinks 0.14954 0.0 0.580208 Low  
cufflinks 4.26618 0.0 12.4093   High
cufflinks 0.166282 0.0 0.64264 Low  
cufflinks 0.0402552 0.0 0.164585 Low Low
cufflinks 0.727303 0.0 2.61256    
cufflinks 0.418112 0.0 1.54919    
cufflinks 0.418695 0.0 1.5508    
cufflinks 0.112        
cufflinks 0.078        
cufflinks 0.245        
cufflinks 0.112        
cufflinks 0.022     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.78       High
cufflinks 0.37        
cufflinks 0.173        
cufflinks 0.052     Low Low
cufflinks 0.694       High
cufflinks 0.123        
cufflinks 1.047       High
cufflinks 0.964       High
cufflinks 0.102        
cufflinks 0.816       High
cufflinks 0.17        

0 Strain