Gene : Glyma.12G180800 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10799:SF779 - SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY A MEMBER 3-LIKE 3-RELATED Genomic Order:  1808
Name:  ? Glyma.12G180800 Secondary Identifier:  ? PAC:30546487
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G180800 0.5kb upstream 0.5kb upstream 10123 true Chr12: 34134388-34144510 Glycine max
Glyma.12G180800 0.5kb upstream 0.5kb upstream 500 false Chr12: 34134388-34134887 Glycine max
Glyma.12G180800 0.5kb downstream 0.5kb downstream 10123 true Chr12: 34134888-34145010 Glycine max
Glyma.12G180800 0.5kb downstream 0.5kb downstream 500 false Chr12: 34144511-34145010 Glycine max
Glyma.12G180800 1.0kb upstream 1.0kb upstream 10623 true Chr12: 34133888-34144510 Glycine max
Glyma.12G180800 1.0kb upstream 1.0kb upstream 1000 false Chr12: 34133888-34134887 Glycine max
Glyma.12G180800 1.0kb downstream 1.0kb downstream 10623 true Chr12: 34134888-34145510 Glycine max
Glyma.12G180800 1.0kb downstream 1.0kb downstream 1000 false Chr12: 34144511-34145510 Glycine max
Glyma.12G180800 2.0kb upstream 2.0kb upstream 11623 true Chr12: 34132888-34144510 Glycine max
Glyma.12G180800 2.0kb upstream 2.0kb upstream 2000 false Chr12: 34132888-34134887 Glycine max
Glyma.12G180800 2.0kb downstream 2.0kb downstream 11623 true Chr12: 34134888-34146510 Glycine max
Glyma.12G180800 2.0kb downstream 2.0kb downstream 2000 false Chr12: 34144511-34146510 Glycine max
Glyma.12G180800 5.0kb upstream 5.0kb upstream 14623 true Chr12: 34129888-34144510 Glycine max
Glyma.12G180800 5.0kb upstream 5.0kb upstream 5000 false Chr12: 34129888-34134887 Glycine max
Glyma.12G180800 5.0kb downstream 5.0kb downstream 14623 true Chr12: 34134888-34149510 Glycine max
Glyma.12G180800 5.0kb downstream 5.0kb downstream 5000 false Chr12: 34144511-34149510 Glycine max
Glyma.12G180800 10.0kb upstream 10.0kb upstream 19623 true Chr12: 34124888-34144510 Glycine max
Glyma.12G180800 10.0kb upstream 10.0kb upstream 10000 false Chr12: 34124888-34134887 Glycine max
Glyma.12G180800 10.0kb downstream 10.0kb downstream 19623 true Chr12: 34134888-34154510 Glycine max
Glyma.12G180800 10.0kb downstream 10.0kb downstream 10000 false Chr12: 34144511-34154510 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305577 5265 Fabidae View MSA
124063428 5270 Rosid View MSA
123739188 5271 Pentapetalae View MSA
122788458 5272 Eudicot View MSA
122044838 5273 Angiosperm View MSA
121345096 5274 Embryophyte View MSA
123428510 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.28145 0.0 9.10802    
cufflinks 3.95681 0.0 10.828    
cufflinks 5.52351 0.0 14.8353   High
cufflinks 2.45009 0.0 7.01304    
cufflinks 1.52248 0.0 4.63597    
cufflinks 0.507532 0.0 1.77414   Low
cufflinks 2.85249 0.0 8.02914    
cufflinks 1.98158 0.0 5.82243    
cufflinks 2.07959 0.0 6.06899    
cufflinks 0.669        
cufflinks 0.648        
cufflinks 2.038       High
cufflinks 0.857        
cufflinks 0.898        
cufflinks 0.73        
cufflinks 1.073        
cufflinks 0.649        
cufflinks 1.554       High
cufflinks 2.554       High
cufflinks 0.988        
cufflinks 0.577       Low
cufflinks 1.226        
cufflinks 1.724       High
cufflinks 0.886        
cufflinks 0.993        
cufflinks 0.573       Low

0 Strain