Gene : Glyma.12G182000 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR10792:SF8 - RIBOSOME BIOGENESIS PROTEIN RLP24-RELATED Genomic Order:  1820
Name:  ? Glyma.12G182000 Secondary Identifier:  ? PAC:30548669
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G182000 0.5kb upstream 0.5kb upstream 2367 true Chr12: 34287452-34289818 Glycine max
Glyma.12G182000 0.5kb upstream 0.5kb upstream 500 false Chr12: 34287452-34287951 Glycine max
Glyma.12G182000 0.5kb downstream 0.5kb downstream 2367 true Chr12: 34287952-34290318 Glycine max
Glyma.12G182000 0.5kb downstream 0.5kb downstream 500 false Chr12: 34289819-34290318 Glycine max
Glyma.12G182000 1.0kb upstream 1.0kb upstream 2867 true Chr12: 34286952-34289818 Glycine max
Glyma.12G182000 1.0kb upstream 1.0kb upstream 1000 false Chr12: 34286952-34287951 Glycine max
Glyma.12G182000 1.0kb downstream 1.0kb downstream 2867 true Chr12: 34287952-34290818 Glycine max
Glyma.12G182000 1.0kb downstream 1.0kb downstream 1000 false Chr12: 34289819-34290818 Glycine max
Glyma.12G182000 2.0kb upstream 2.0kb upstream 3867 true Chr12: 34285952-34289818 Glycine max
Glyma.12G182000 2.0kb upstream 2.0kb upstream 2000 false Chr12: 34285952-34287951 Glycine max
Glyma.12G182000 2.0kb downstream 2.0kb downstream 3867 true Chr12: 34287952-34291818 Glycine max
Glyma.12G182000 2.0kb downstream 2.0kb downstream 2000 false Chr12: 34289819-34291818 Glycine max
Glyma.12G182000 5.0kb upstream 5.0kb upstream 6867 true Chr12: 34282952-34289818 Glycine max
Glyma.12G182000 5.0kb upstream 5.0kb upstream 5000 false Chr12: 34282952-34287951 Glycine max
Glyma.12G182000 5.0kb downstream 5.0kb downstream 6867 true Chr12: 34287952-34294818 Glycine max
Glyma.12G182000 5.0kb downstream 5.0kb downstream 5000 false Chr12: 34289819-34294818 Glycine max
Glyma.12G182000 10.0kb upstream 10.0kb upstream 11867 true Chr12: 34277952-34289818 Glycine max
Glyma.12G182000 10.0kb upstream 10.0kb upstream 10000 false Chr12: 34277952-34287951 Glycine max
Glyma.12G182000 10.0kb downstream 10.0kb downstream 11867 true Chr12: 34287952-34299818 Glycine max
Glyma.12G182000 10.0kb downstream 10.0kb downstream 10000 false Chr12: 34289819-34299818 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303025 5265 Fabidae View MSA
124060903 5270 Rosid View MSA
123737225 5271 Pentapetalae View MSA
122786716 5272 Eudicot View MSA
122045898 5273 Angiosperm View MSA
121346492 5274 Embryophyte View MSA
123427829 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.7929 0.0 72.1105 High  
cufflinks 28.2166 0.0 97.96 High  
cufflinks 13.8834 0.0 53.3243   Low
cufflinks 22.3391 0.0 78.6109 High  
cufflinks 33.2309 0.0 114.198 High  
cufflinks 33.3912 0.0 116.632 High High
cufflinks 24.4978 0.0 86.1731 High  
cufflinks 26.7871 0.0 92.9175 High  
cufflinks 29.7938 0.0 102.709 High  
cufflinks 4.53        
cufflinks 1.848       Low
cufflinks 3.935        
cufflinks 9.621     High High
cufflinks 14.382     High High
cufflinks 1.917       Low
cufflinks 4.742        
cufflinks 3.122        
cufflinks 4.759        
cufflinks 5.091        
cufflinks 3.244        
cufflinks 2.503        
cufflinks 3.455        
cufflinks 5.722        
cufflinks 1.965       Low
cufflinks 3.972        
cufflinks 3.239        

0 Strain