Gene : Glyma.12G182100 G. max Wm82.a2.v1
Defline:  (1 of 31) PF05910 - Plant protein of unknown function (DUF868) (DUF868) Genomic Order:  1821
Name:  ? Glyma.12G182100 Secondary Identifier:  ? PAC:30548260
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G182100 0.5kb upstream 0.5kb upstream 2009 true Chr12: 34299158-34301166 Glycine max
Glyma.12G182100 0.5kb upstream 0.5kb upstream 500 false Chr12: 34299158-34299657 Glycine max
Glyma.12G182100 0.5kb downstream 0.5kb downstream 2009 true Chr12: 34299658-34301666 Glycine max
Glyma.12G182100 0.5kb downstream 0.5kb downstream 500 false Chr12: 34301167-34301666 Glycine max
Glyma.12G182100 1.0kb upstream 1.0kb upstream 2509 true Chr12: 34298658-34301166 Glycine max
Glyma.12G182100 1.0kb upstream 1.0kb upstream 1000 false Chr12: 34298658-34299657 Glycine max
Glyma.12G182100 1.0kb downstream 1.0kb downstream 2509 true Chr12: 34299658-34302166 Glycine max
Glyma.12G182100 1.0kb downstream 1.0kb downstream 1000 false Chr12: 34301167-34302166 Glycine max
Glyma.12G182100 2.0kb upstream 2.0kb upstream 3509 true Chr12: 34297658-34301166 Glycine max
Glyma.12G182100 2.0kb upstream 2.0kb upstream 2000 false Chr12: 34297658-34299657 Glycine max
Glyma.12G182100 2.0kb downstream 2.0kb downstream 3509 true Chr12: 34299658-34303166 Glycine max
Glyma.12G182100 2.0kb downstream 2.0kb downstream 2000 false Chr12: 34301167-34303166 Glycine max
Glyma.12G182100 5.0kb upstream 5.0kb upstream 6509 true Chr12: 34294658-34301166 Glycine max
Glyma.12G182100 5.0kb upstream 5.0kb upstream 5000 false Chr12: 34294658-34299657 Glycine max
Glyma.12G182100 5.0kb downstream 5.0kb downstream 6509 true Chr12: 34299658-34306166 Glycine max
Glyma.12G182100 5.0kb downstream 5.0kb downstream 5000 false Chr12: 34301167-34306166 Glycine max
Glyma.12G182100 10.0kb upstream 10.0kb upstream 11509 true Chr12: 34289658-34301166 Glycine max
Glyma.12G182100 10.0kb upstream 10.0kb upstream 10000 false Chr12: 34289658-34299657 Glycine max
Glyma.12G182100 10.0kb downstream 10.0kb downstream 11509 true Chr12: 34299658-34311166 Glycine max
Glyma.12G182100 10.0kb downstream 10.0kb downstream 10000 false Chr12: 34301167-34311166 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310869 5265 Fabidae View MSA
124061671 5270 Rosid View MSA
123746033 5271 Pentapetalae View MSA
122790628 5272 Eudicot View MSA
122050647 5273 Angiosperm View MSA
121312046 5274 Embryophyte View MSA
123349257 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.558079 0.0 2.06694   Low
cufflinks 2.92099 0.0 9.30794    
cufflinks 9.21099 0.0 25.4154    
cufflinks 2.78887 0.0 8.93359    
cufflinks 2.56105 0.0 8.32229    
cufflinks 20.5457 0.0 54.8141   High
cufflinks 1.86373 0.0 6.30917    
cufflinks 4.46643 0.0 13.3551    
cufflinks 3.25112 0.0 10.2001    
cufflinks 8.13     High High
cufflinks 6.459     High High
cufflinks 8.791     High High
cufflinks 5.308        
cufflinks 4.058        
cufflinks 0.628       Low
cufflinks 1.345        
cufflinks 2.423        
cufflinks 3.618        
cufflinks 1.169       Low
cufflinks 1.207       Low
cufflinks 5.941     High  
cufflinks 1.744        
cufflinks 2.391        
cufflinks 4.613        
cufflinks 1.404        
cufflinks 4.639        

0 Strain